RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 HAUS6Q7Z4H7 955 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 ADCK2Q7Z695 626 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 LDB1Q86U70 411 aaPredicted RBP3.17□□□□□ -1.9
TRAV28-201ENST00000557548 ADIPOR2Q86V24 386 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 CEP57Q86XR8 500 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 ZDHHC23Q8IYP9 409 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 FBXO39Q8N4B4 442 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 TSPAN14Q8NG11 270 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 OR8H1Q8NGG4 311 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 ZNF398Q8TD17 642 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 RSPH1Q8WYR4 309 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 MAP4K1Q92918 833 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 ERGIC1Q969X5 290 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 EME1Q96AY2 570 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 MSI2Q96DH6 328 aaKnown RBP3.17□□□□□ -1.9
TRAV28-201ENST00000557548 ZNF503Q96F45 646 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 CLMNQ96JQ2 1002 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 ZNF558Q96NG5 402 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 FERMT1Q9BQL6 677 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 FUT8Q9BYC5 575 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 NPFFR1Q9GZQ6 430 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 SPATC1LQ9H0A9 340 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 MMP27Q9H306 513 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 SPAG4Q9NPE6 437 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 CYSLTR2Q9NS75 346 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 TAS2R14Q9NYV8 317 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 COPG2Q9UBF2 871 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 DNAJB4Q9UDY4 337 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 KLHL20Q9Y2M5 609 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 LIPGQ9Y5X9 500 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 WNT6Q9Y6F9 365 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.17□□□□□ -1.9
TRAV28-201ENST00000557548 ARHGEF40Q8TER5 1519 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 COL4A3Q01955 1670 aa3.17□□□□□ -1.9
TRAV28-201ENST00000557548 GPRASP1Q5JY77 1395 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 CPED1A4D0V7 1026 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 WIPF3A6NGB9 483 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 MATN3O15232 486 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 IPO8O15397 1037 aaKnown RBP3.16□□□□□ -1.9
TRAV28-201ENST00000557548 KCNK5O95279 499 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 MT-ND3P03897 115 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 MMP3P08254 477 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 VPREB1P12018 145 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 HSPA4P34932 840 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 TCF7P36402 384 aaPredicted RBP3.16□□□□□ -1.9
TRAV28-201ENST00000557548 SPOCK1Q08629 439 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 FAM27E3Q08E93 113 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 SREBF2Q12772 1141 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 FOXE3Q13461 319 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 TUBB2AQ13885 445 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 TMEM119Q4V9L6 283 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 EARS2Q5JPH6 523 aaKnown RBP3.16□□□□□ -1.9
TRAV28-201ENST00000557548 ISM2Q6H9L7 571 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 TMEM71Q6P5X7 295 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 ZNF449Q6P9G9 518 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 TRILQ7L0X0 811 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 FAM217AQ8IXS0 508 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 SIX6OS1Q8N1H7 587 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 OR10S1Q8NGN2 331 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 FIBINQ8TAL6 211 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 CEP76Q8TAP6 659 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 SLC9A6Q92581 669 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 KRT35Q92764 455 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 CORO2AQ92828 525 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 UROC1Q96N76 676 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 INTS14Q96SY0 518 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 DDOQ99489 341 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 TUBB2BQ9BVA1 445 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 ZNF341Q9BYN7 854 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 PCED1AQ9H1Q7 454 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 PPIL3Q9H2H8 161 aaKnown RBP3.16□□□□□ -1.9
TRAV28-201ENST00000557548 KCNK15Q9H427 330 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 EPB41L5Q9HCM4 733 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 HINT3Q9NQE9 182 aaKnown RBP3.16□□□□□ -1.9
TRAV28-201ENST00000557548 RNF146Q9NTX7 359 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 LARSQ9P2J5 1176 aaKnown RBP3.16□□□□□ -1.9
TRAV28-201ENST00000557548 DDX25Q9UHL0 483 aaKnown RBP3.16□□□□□ -1.9
TRAV28-201ENST00000557548 KCNK7Q9Y2U2 307 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 KNSTRNQ9Y448 316 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 NFE2L3Q9Y4A8 694 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 PCDHGA5Q9Y5G8 931 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 TNFRSF18Q9Y5U5 241 aa3.16□□□□□ -1.9
TRAV28-201ENST00000557548 KAT6AQ92794 2004 aa3.15□□□□□ -1.9
TRAV28-201ENST00000557548 A0A0B4J293 547 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 ENO4A6NNW6 628 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 KDM4EB2RXH2 506 aaPredicted RBP3.15□□□□□ -1.91
TRAV28-201ENST00000557548 C19orf81C9J6K1 198 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 F8W810 466 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 DNM1LO00429 736 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 RTCAO00442 366 aaKnown RBP3.15□□□□□ -1.91
TRAV28-201ENST00000557548 PSMD14O00487 310 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 MAP2K7O14733 419 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 SMAD9O15198 467 aaKnown RBP3.15□□□□□ -1.91
TRAV28-201ENST00000557548 HTATSF1O43719 755 aaKnown RBP3.15□□□□□ -1.91
TRAV28-201ENST00000557548 STX6O43752 255 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 PDGFRAP16234 1089 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 STMN1P16949 149 aa3.15□□□□□ -1.91
TRAV28-201ENST00000557548 WT1P19544 449 aaPredicted RBP3.15□□□□□ -1.91
TRAV28-201ENST00000557548 GPD1P21695 349 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms