RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 NFKBIL1Q9UBC1 381 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-232ENST00000557442 FEZ2Q9UHY8 353 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-232ENST00000557442 KLF15Q9UIH9 416 aa10.54□□□□□ -0.72
HNRNPC-232ENST00000557442 MOSPD1Q9UJG1 213 aa10.54□□□□□ -0.72
HNRNPC-232ENST00000557442 PCOLCE2Q9UKZ9 415 aa10.54□□□□□ -0.72
HNRNPC-232ENST00000557442 PNMA8BQ9ULN7 279 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-232ENST00000557442 PKP3Q9Y446 797 aa10.54□□□□□ -0.72
HNRNPC-232ENST00000557442 SAR1BQ9Y6B6 198 aa10.54□□□□□ -0.72
HNRNPC-232ENST00000557442 FADS2P1A8MWK0 482 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 GIPC1O14908 333 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 SCAMP1O15126 338 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 FANCGO15287 622 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 BUD23O43709 281 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 KCNK5O95279 499 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 APRTP07741 180 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 HOXC4P09017 264 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 BPIP17213 487 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 RPL22P35268 128 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 VPS41P49754 854 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 BLKP51451 505 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 HK3P52790 923 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 SRP54P61011 504 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 BASP1P80723 227 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 SEMA5AQ13591 1074 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 TCEA2Q15560 299 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 TAF1AQ15573 450 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 TRIP13Q15645 432 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 CYP1B1Q16678 543 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 KCTD19Q17RG1 926 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 HS1BP3Q53T59 392 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 PRRT3Q5FWE3 981 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 PPM1JQ5JR12 505 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 KCTD16Q68DU8 428 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 CCDC137Q6PK04 289 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 C4orf22Q6V702 233 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 PPP1R21Q6ZMI0 780 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 DBX2Q6ZNG2 339 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 KANSL1Q7Z3B3 1105 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 LINC00523Q86TU6 105 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 EID2Q8N6I1 236 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 GPR26Q8NDV2 337 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 OR1E3Q8WZA6 343 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 TRIM44Q96DX7 344 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 HIC2Q96JB3 615 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 PLEKHG4BQ96PX9 1271 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 ZSCAN5AQ9BUG6 496 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 LRRC61Q9BV99 259 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 TCEAL2Q9H3H9 227 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 SUDS3Q9H7L9 328 aaPredicted RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 MRPL40Q9NQ50 206 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 PIH1D1Q9NWS0 290 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.53□□□□□ -0.721e-9■■■□□ 15.2
HNRNPC-232ENST00000557442 SPASTQ9UBP0 616 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 FTSJ1Q9UET6 329 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 ARL5AQ9Y689 179 aa10.53□□□□□ -0.72
HNRNPC-232ENST00000557442 UNC13CQ8NB66 2214 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 SPAARA0A1B0GVQ0 90 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 PRSS38A1L453 326 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 NEMP2A6NFY4 417 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 C2orf81A6NN90 581 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 STX7O15400 261 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 AQP9O43315 295 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 CRTAMO95727 393 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 CEACAM1P13688 526 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 CTSEP14091 401 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 LPOP22079 712 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 COILP38432 576 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 SPAM1P38567 509 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 FNTAP49354 379 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 ETF1P62495 437 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 SEPT6Q14141 434 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 POU6F1Q14863 301 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 ZDHHC20Q5W0Z9 365 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 DENND5AQ6IQ26 1287 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 FAM151BQ6UXP7 276 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 SYT10Q6XYQ8 523 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 NLRP8Q86W28 1048 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 SLC25A45Q8N413 288 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 TRAM1L1Q8N609 369 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 DNAAF3Q8N9W5 541 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 OR52K1Q8NGK4 314 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 BAHD1Q8TBE0 780 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 BRSK1Q8TDC3 778 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 GRK7Q8WTQ7 553 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 C16orf45Q96MC5 204 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 FRMD8Q9BZ67 464 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 ARNT2Q9HBZ2 717 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 CYP4F12Q9HCS2 524 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 IL17CQ9P0M4 197 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 DGKBQ9Y6T7 804 aa10.52□□□□□ -0.73
HNRNPC-232ENST00000557442 NCOR2Q9Y618 2525 aa10.51□□□□□ -0.73
HNRNPC-232ENST00000557442 GLYATL1P3A0A0U1RQE8 302 aa10.51□□□□□ -0.73
HNRNPC-232ENST00000557442 TNFRSF10CO14798 259 aa10.51□□□□□ -0.73
HNRNPC-232ENST00000557442 CBFA2T3O75081 653 aa10.51□□□□□ -0.73
HNRNPC-232ENST00000557442 PPFIA2O75334 1257 aa10.51□□□□□ -0.73
HNRNPC-232ENST00000557442 SUN1O94901 812 aa10.51□□□□□ -0.73
HNRNPC-232ENST00000557442 ASMTLO95671 621 aa10.51□□□□□ -0.73
HNRNPC-232ENST00000557442 GAS8O95995 478 aa10.51□□□□□ -0.73
HNRNPC-232ENST00000557442 TNFP01375 233 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms