RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 BBS5Q8N3I7 341 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 SH3KBP1Q96B97 665 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 AP2M1Q96CW1 435 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 PCMTD1Q96MG8 357 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-223ENST00000556689 SNRNP25Q9BV90 132 aaKnown RBP12.58□□□□□ -0.4
SHMT2-223ENST00000556689 ABCG8Q9H221 673 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 CLSTN2Q9H4D0 955 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 APMAPQ9HDC9 416 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 LMBRD1Q9NUN5 540 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 PARVAQ9NVD7 372 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 ZNHIT2Q9UHR6 403 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 SIK3Q9Y2K2 1263 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 PPIL1Q9Y3C6 166 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 FLNCQ14315 2725 aa12.58□□□□□ -0.4
SHMT2-223ENST00000556689 MKRN2OSH3BPM6 223 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 PRPSAP2O60256 369 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 RNF8O76064 485 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 PGLSO95336 258 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 EML2O95834 649 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 SOD1P00441 154 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 PYGLP06737 847 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 CTPS1P17812 591 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 TRAF2Q12933 501 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 NFATC2Q13469 925 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 MAMLD1Q13495 774 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 MAP7Q14244 749 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 KRT31Q15323 416 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 ATP1A1-AS1Q5TC04 95 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 IYDQ6PHW0 289 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 RFLNAQ6ZTI6 216 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 PSTKQ8IV42 348 aaKnown RBP12.57□□□□□ -0.4
SHMT2-223ENST00000556689 PGBD5Q8N414 524 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 ESX1Q8N693 406 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 ARFGAP1Q8N6T3 406 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 NEK11Q8NG66 645 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 EXD1Q8NHP7 514 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 ENOX1Q8TC92 643 aaKnown RBP12.57□□□□□ -0.4
SHMT2-223ENST00000556689 MCCC1Q96RQ3 725 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-223ENST00000556689 PEBP4Q96S96 227 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 STN1Q9H668 368 aaKnown RBP12.57□□□□□ -0.4
SHMT2-223ENST00000556689 SARS2Q9NP81 518 aaKnown RBP12.57□□□□□ -0.4
SHMT2-223ENST00000556689 CWC15Q9P013 229 aaKnown RBP12.57□□□□□ -0.4
SHMT2-223ENST00000556689 CD84Q9UIB8 345 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 KCNMB2Q9Y691 235 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 RPS6KL1Q9Y6S9 549 aa12.57□□□□□ -0.4
SHMT2-223ENST00000556689 A0A0U1RQS6 177 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 ASMTLO95671 621 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 DLGAP3O95886 979 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 PEX11BO96011 259 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 MIPP30301 263 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 STAT5AP42229 794 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 MLLT10P55197 1068 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 PTSQ03393 145 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 DPYSQ14117 519 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 RALGPS1Q5JS13 557 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 MARC1Q5VT66 337 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 TCTN3Q6NUS6 607 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 TRIM74Q86UV6 250 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 FNIP1Q8TF40 1166 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 NSMCE1Q8WV22 266 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 PIH1D2Q8WWB5 315 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 SCAMP4Q969E2 229 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 COX14Q96I36 57 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 MGME1Q9BQP7 344 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-223ENST00000556689 ZWILCHQ9H900 591 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 TBC1D29Q9UFV1 150 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 KLHL3Q9UH77 587 aa12.56□□□□□ -0.4
SHMT2-223ENST00000556689 MRPS18BQ9Y676 258 aaKnown RBP12.56□□□□□ -0.4
SHMT2-223ENST00000556689 K7EM74 188 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 INPP4BO15327 924 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 MAFKO60675 156 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 KRT7P08729 469 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 CCDC172P0C7W6 258 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 NR1D1P20393 614 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 TNFAIP3P21580 790 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 F8A1P23610 371 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 DLSTP36957 453 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 MAPK9P45984 424 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 EPHA4P54764 986 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 MAXP61244 160 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 ERV3-1Q14264 604 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 CDKAL1Q5VV42 579 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 LRRC66Q68CR7 880 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 PLEKHA7Q6IQ23 1121 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 PPP1R2P3Q6NXS1 205 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 C6orf15Q6UXA7 325 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-223ENST00000556689 ASB18Q6ZVZ8 466 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 ZNF765Q7L2R6 523 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 CHST15Q7LFX5 561 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-223ENST00000556689 PLXDC1Q8IUK5 500 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 CCDC13Q8IYE1 715 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 AGAP2Q99490 1192 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 ULBP3Q9BZM4 244 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 NUP62CLQ9H1M0 184 aa12.55□□□□□ -0.4
SHMT2-223ENST00000556689 EPB41L1Q9H4G0 881 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms