RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ANKRD7Q92527 254 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 EXOC4Q96A65 974 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 LRRC46Q96FV0 321 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 BICD1Q96G01 975 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 CLMNQ96JQ2 1002 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 WDR24Q96S15 920 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 PARK7Q99497 189 aaKnown RBP5.26□□□□□ -1.57
SRP54-211ENST00000556445 CRACR2AQ9BSW2 395 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 DPH1Q9BZG8 443 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 PORCNQ9H237 461 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 PDCL3Q9H2J4 239 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 SMARCAD1Q9H4L7 1026 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 DHX33Q9H6R0 707 aaKnown RBP5.26□□□□□ -1.57
SRP54-211ENST00000556445 GBA2Q9HCG7 927 aaPredicted RBP5.26□□□□□ -1.57
SRP54-211ENST00000556445 PDE7BQ9NP56 450 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 C5AR2Q9P296 337 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 MTO1Q9Y2Z2 717 aaKnown RBP5.26□□□□□ -1.57
SRP54-211ENST00000556445 JRKLQ9Y4A0 524 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 LCTP09848 1927 aa5.26□□□□□ -1.57
SRP54-211ENST00000556445 ZNFX1Q9P2E3 1918 aaKnown RBP5.26□□□□□ -1.57
SRP54-211ENST00000556445 CCL15-CCL14A0A0B4J2E2 113 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 CTAGE15A4D2H0 777 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 ZNF233A6NK53 670 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 K7ERI5 159 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 MAGEB2O15479 319 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 PIAS2O75928 621 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 STBD1O95210 358 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 ESRRBO95718 433 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 F9P00740 461 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 GH1P01241 217 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 PIGRP01833 764 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 CTAGE8P0CG41 777 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 NPPBP16860 134 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 TCP1P17987 556 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 FDXRP22570 491 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 TCF7P36402 384 aaPredicted RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 MPLP40238 635 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 EIF2DP41214 584 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 LIG4P49917 911 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 MXI1P50539 228 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 AP3M2P53677 418 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 MFAP3P55082 362 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 SP4Q02446 784 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 C17orf67Q0P5P2 114 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 TFDP1Q14186 410 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 CCL15Q16663 113 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 ASTE1Q2TB18 679 aaPredicted RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 CELF3Q5SZQ8 465 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 PAPD7Q5XG87 772 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 PLA2G4FQ68DD2 849 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 KRT39Q6A163 491 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 PPP1R2P3Q6NXS1 205 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 SHQ1Q6PI26 577 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 SLC2A7Q6PXP3 512 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 KLHL24Q6TFL4 600 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 OLFML1Q6UWY5 402 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 GLRX5Q86SX6 157 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 CTAGE6Q86UF2 777 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 ZBTB8OSQ8IWT0 167 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 CTAGE4Q8IX94 777 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 SYCE1Q8N0S2 351 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 IL17RDQ8NFM7 739 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 ATP8B4Q8TF62 1192 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 GIMAP1Q8WWP7 306 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 POMGNT1Q8WZA1 660 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 GLG1Q92896 1179 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 CLPTM1LQ96KA5 538 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 TMEM237Q96Q45 408 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 PNKPQ96T60 521 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.25□□□□□ -1.57
SRP54-211ENST00000556445 TLR10Q9BXR5 811 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 MAGEB5Q9BZ81 275 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 INTS2Q9H0H0 1204 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 POLR3FQ9H1D9 316 aaPredicted RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 UNKLQ9H9P5 680 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 SMURF2Q9HAU4 748 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 NOD2Q9HC29 1040 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 SARS2Q9NP81 518 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 FANCFQ9NPI8 374 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 VSX1Q9NZR4 365 aaPredicted RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 CALCOCO1Q9P1Z2 691 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 CPSF2Q9P2I0 782 aaKnown RBP5.25□□□□□ -1.57
SRP54-211ENST00000556445 LPAR3Q9UBY5 353 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 NAALADL1Q9UQQ1 740 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 COQ4Q9Y3A0 265 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 SAR1BQ9Y6B6 198 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 STYXL1Q9Y6J8 313 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 FAM169AQ9Y6X4 670 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 COL1A2P08123 1366 aa5.25□□□□□ -1.57
SRP54-211ENST00000556445 A0A087WZ62 844 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 GSTTP1A0A1W2PQM5 241 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 MYADML2A6NDP7 307 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 MANSC4A6NHS7 340 aaPredicted RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 SLC15A5A6NIM6 579 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 LRRIQ4A6NIV6 560 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 A8MXE2 369 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 BOLA2-SMG1P6H3BVE0 249 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 PDHXO00330 501 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 EPHB6O15197 1021 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 ADAM20O43506 726 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms