RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 AGAP14A8MT82 685 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 FPGTO14772 594 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 ERLIN1O75477 346 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 GOT2P00505 430 aaKnown RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 HOXC4P09017 264 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 ITGALP20701 1170 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 MC4RP32245 332 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 PHBP35232 272 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 PPARGP37231 505 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 GPR1P46091 355 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 PMS2P54278 862 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CACNG1Q06432 222 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 NFATC2Q13469 925 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 PEX6Q13608 980 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 THOC5Q13769 683 aaKnown RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 STAT4Q14765 748 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CHRNA6Q15825 494 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 PLK5Q496M5 336 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 LYPLAL1Q5VWZ2 237 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 ALS2CLQ60I27 953 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 PMS2CLQ68D20 193 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 NEPROQ6NW34 567 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 ZC3H14Q6PJT7 736 aaKnown RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 FAM151BQ6UXP7 276 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 ADAMTSL4Q6UY14 1074 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CERS6Q6ZMG9 384 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CEP68Q76N32 757 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 SNX20Q7Z614 316 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 SDCCAG8Q86SQ7 713 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 SLC41A1Q8IVJ1 513 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 TMEFF1Q8IYR6 380 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 TP53I13Q8NBR0 393 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 GPR150Q8NGU9 434 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 AENQ8WTP8 325 aaKnown RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CAVIN3Q969G5 261 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 ULK4Q96C45 1275 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 SPATA16Q9BXB7 569 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 SEMA4AQ9H3S1 761 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 ASB8Q9H765 288 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 SUDS3Q9H7L9 328 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 PLAC1Q9HBJ0 212 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 C20orf96Q9NUD7 363 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-221ENST00000555773 NINJ2Q9NZG7 142 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CD84Q9UIB8 345 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CCDC151A5D8V7 595 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 MEI4A8MW99 385 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 GAPDHSO14556 408 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 PFDN6O15212 129 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 RAD51BO15315 384 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 CD3EAPO15446 510 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 PRAMEF1O95521 474 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 ARNTP27540 789 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 SSTR1P30872 391 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 DPP6P42658 865 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 GPX6P59796 221 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 YPEL5P62699 121 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 INPP5AQ14642 412 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 FASTKD1Q53R41 847 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 ZRANB3Q5FWF4 1079 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 AARS2Q5JTZ9 985 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 RAET1GQ6H3X3 334 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 MRNIPQ6NTE8 343 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 GSPT2Q8IYD1 628 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 DEFB119Q8N690 84 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 TMEM145Q8NBT3 493 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 HEXDCQ8WVB3 486 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 BTN2A2Q8WVV5 523 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 HNRNPLLQ8WVV9 542 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 CERS2Q96G23 380 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 SERAC1Q96JX3 654 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 HSPA12BQ96MM6 686 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 VPS35Q96QK1 796 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 TCF12Q99081 682 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 ORAI3Q9BRQ5 295 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 FUT8Q9BYC5 575 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 KCNH6Q9H252 994 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 CDC42EP4Q9H3Q1 356 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 VPS37BQ9H9H4 285 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 EBF2Q9HAK2 575 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 MBNL1Q9NR56 388 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 SMOXQ9NWM0 555 aa12.39□□□□□ -0.43
SHMT2-221ENST00000555773 FNDC3AQ9Y2H6 1198 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.39□□□□□ -0.43
SHMT2-221ENST00000555773 NUMA1Q14980 2115 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 TRBV5-4A0A0C4DH59 114 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 CCL22O00626 93 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A9O60656 530 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 PCCBP05166 539 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A6P19224 532 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A1P22309 533 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A4P22310 534 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 FOXN2P32314 431 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 STX2P32856 288 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A3P35503 534 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 UGT1A5P35504 534 aa12.38□□□□□ -0.43
SHMT2-221ENST00000555773 RACK1P63244 317 aaKnown RBP12.38□□□□□ -0.43
SHMT2-221ENST00000555773 MGAT5Q09328 741 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms