RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 NRROSQ86YC3 692 aa15.35■□□□□ 0.05
SNX6-205ENST00000555648 SFTPA2Q8IWL1 248 aa15.35■□□□□ 0.05
SNX6-205ENST00000555648 RAVER1Q8IY67 606 aaKnown RBP15.35■□□□□ 0.05
SNX6-205ENST00000555648 SMIM14Q96QK8 99 aa15.35■□□□□ 0.05
SNX6-205ENST00000555648 CHP1Q99653 195 aa15.35■□□□□ 0.05
SNX6-205ENST00000555648 DDX56Q9NY93 547 aaKnown RBP15.35■□□□□ 0.05
SNX6-205ENST00000555648 ZNHIT2Q9UHR6 403 aa15.35■□□□□ 0.05
SNX6-205ENST00000555648 ZZEF1O43149 2961 aa15.35■□□□□ 0.05
SNX6-205ENST00000555648 FREM2Q5SZK8 3169 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 ZNF487B1APH4 448 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 ERVH48-1M5A8F1 160 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 SPOPO43791 374 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 FUCA1P04066 466 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 TNNT3P45378 269 aaPredicted RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 NOP2P46087 812 aaKnown RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 GPR3P46089 330 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 MAPK10P53779 464 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 IFI35P80217 286 aaPredicted RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 ZFP36L1Q07352 338 aaKnown RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 SLC10A2Q12908 348 aaPredicted RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 CLPPQ16740 277 aaPredicted RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 LRRC38Q5VT99 294 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 USP53Q70EK8 1073 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 BZW1Q7L1Q6 419 aaKnown RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 VSIG1Q86XK7 387 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 RHOT1Q8IXI2 618 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 RNF25Q96BH1 459 aaPredicted RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 AHCYL2Q96HN2 611 aaKnown RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 BRD8Q9H0E9 1235 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 FAM83DQ9H4H8 585 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 STN1Q9H668 368 aaKnown RBP15.34■□□□□ 0.05
SNX6-205ENST00000555648 RDH14Q9HBH5 336 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 PCDHB11Q9Y5F2 797 aa15.34■□□□□ 0.05
SNX6-205ENST00000555648 ASXL3Q9C0F0 2248 aa15.33■□□□□ 0.05
SNX6-205ENST00000555648 RGSL1A5PLK6 1076 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 ANKRD66B4E2M5 251 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 AKR1B15C9JRZ8 316 aaPredicted RBP15.33■□□□□ 0.04
SNX6-205ENST00000555648 B4GAT1O43505 415 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 PRLP01236 227 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 SPINT3P49223 89 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 DYNLT1P63172 113 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 SKOR1P84550 965 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 B4GALNT1Q00973 533 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 CLN3Q13286 438 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 QPCTQ16769 361 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 PYCR3Q53H96 274 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 KDELC2Q7Z4H8 507 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 NT5DC3Q86UY8 548 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 PLD5Q8N7P1 536 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 SCARF2Q96GP6 870 aaPredicted RBP15.33■□□□□ 0.04
SNX6-205ENST00000555648 AGAP3Q96P47 875 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 LYSMD1Q96S90 227 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 CCNL2Q96S94 520 aaPredicted RBP15.33■□□□□ 0.04
SNX6-205ENST00000555648 AGAP2Q99490 1192 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 SLC38A3Q99624 504 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 RAD18Q9NS91 495 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 KCNK4Q9NYG8 393 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 INTUQ9ULD6 942 aa15.33■□□□□ 0.04
SNX6-205ENST00000555648 NVLO15381 856 aaKnown RBP15.32■□□□□ 0.04
SNX6-205ENST00000555648 MTA2O94776 668 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 SOD1P00441 154 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 SLC4A1P02730 911 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 PRB1P04280 392 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 ITIH1P19827 911 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 ZBTB17Q13105 803 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 TFDP2Q14188 446 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 GALNT3Q14435 633 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 PCSK7Q16549 785 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 SLC9A4Q6AI14 798 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 ZNF438Q7Z4V0 828 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 C17orf82Q86X59 251 aaPredicted RBP15.32■□□□□ 0.04
SNX6-205ENST00000555648 NAGSQ8N159 534 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 CCDC112Q8NEF3 446 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 PTCD2Q8WV60 388 aaKnown RBP15.32■□□□□ 0.04
SNX6-205ENST00000555648 PATE1Q8WXA2 126 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 DPYSL5Q9BPU6 564 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 CEP41Q9BYV8 373 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 SEMA6CQ9H3T2 930 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 RMI1Q9H9A7 625 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 ZFYVE1Q9HBF4 777 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 VPS18Q9P253 973 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 PLEKHM1Q9Y4G2 1056 aa15.32■□□□□ 0.04
SNX6-205ENST00000555648 ATRXP46100 2492 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 TRBV23OR9-2A0A075B6M9 112 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 K7ENP7 123 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
SNX6-205ENST00000555648 SLC2A4P14672 509 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 IHHQ14623 411 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 INO80CQ6PI98 192 aaPredicted RBP15.31■□□□□ 0.04
SNX6-205ENST00000555648 CHST15Q7LFX5 561 aaPredicted RBP15.31■□□□□ 0.04
SNX6-205ENST00000555648 SLITRK4Q8IW52 837 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 OR10G6Q8NH81 332 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 USP7Q93009 1102 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 COX14Q96I36 57 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 SPATA16Q9BXB7 569 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 GPR63Q9BZJ6 419 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 TRIM5Q9C035 493 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 SLC25A51Q9H1U9 297 aa15.31■□□□□ 0.04
SNX6-205ENST00000555648 LUC7LQ9NQ29 371 aaKnown RBP15.31■□□□□ 0.04
SNX6-205ENST00000555648 HGSO14964 777 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms