RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 FASLGP48023 281 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 DPYSQ14117 519 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 LACTB2Q53H82 288 aaPredicted RBP13.03□□□□□ -0.32
XRCC3-212ENST00000555231 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.03□□□□□ -0.32
XRCC3-212ENST00000555231 ADAMTSL4Q6UY14 1074 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 GALNT13Q8IUC8 556 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 SFRP1Q8N474 314 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 APOBEC4Q8WW27 367 aaKnown RBP13.03□□□□□ -0.32
XRCC3-212ENST00000555231 STARD8Q92502 1023 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 EIF3CQ99613 913 aaKnown RBP13.03□□□□□ -0.32
XRCC3-212ENST00000555231 PARVAQ9NVD7 372 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 TP53TG5Q9Y2B4 290 aa13.03□□□□□ -0.32
XRCC3-212ENST00000555231 ZNF106Q9H2Y7 1883 aaKnown RBP13.02□□□□□ -0.32
XRCC3-212ENST00000555231 PRR19A6NJB7 356 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 K7EM74 188 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 RNF8O76064 485 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 PDHA1P08559 390 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 NFKBIAP25963 317 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 HSPA9P38646 679 aaKnown RBP13.02□□□□□ -0.33
XRCC3-212ENST00000555231 HHEXQ03014 270 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 UBXN1Q04323 297 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 DPTQ07507 201 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 ABHD18Q0P651 414 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 CT47A1Q5JQC4 288 aaPredicted RBP13.02□□□□□ -0.33
XRCC3-212ENST00000555231 ARMC12Q5T9G4 340 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 LRRC66Q68CR7 880 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 HIST2H2BCQ6DN03 193 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 PLEKHA7Q6IQ23 1121 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 USP45Q70EL2 814 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 CHST15Q7LFX5 561 aaPredicted RBP13.02□□□□□ -0.33
XRCC3-212ENST00000555231 FAM26EQ8N5C1 309 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 LZTR1Q8N653 840 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 PIH1D2Q8WWB5 315 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 MCCC1Q96RQ3 725 aaPredicted RBP13.02□□□□□ -0.33
XRCC3-212ENST00000555231 MGME1Q9BQP7 344 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 EFHD1Q9BUP0 239 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 FBXO8Q9NRD0 319 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 ZNHIT2Q9UHR6 403 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 KCNK6Q9Y257 313 aa13.02□□□□□ -0.33
XRCC3-212ENST00000555231 TMEM184BQ9Y519 407 aaPredicted RBP13.02□□□□□ -0.33
XRCC3-212ENST00000555231 NBPF19A0A087WUL8 3843 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 TMEM191CA6NGB0 347 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 MAFKO60675 156 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 SNX2O60749 519 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 LRCH4O75427 683 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 DLGAP3O95886 979 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 ATP1A1P05023 1023 aaKnown RBP13.01□□□□□ -0.33
XRCC3-212ENST00000555231 FERP16591 822 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 F8A1P23610 371 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 MAN1A1P33908 653 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 HCAR3P49019 387 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 MLLT10P55197 1068 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 PTSQ03393 145 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 KLRB1Q12918 225 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 SEPT6Q14141 434 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 SMTNL2Q2TAL5 461 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 C4orf17Q53FE4 359 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 BBS5Q8N3I7 341 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.01□□□□□ -0.33
XRCC3-212ENST00000555231 MIB2Q96AX9 1013 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 COX14Q96I36 57 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 RIOK2Q9BVS4 552 aaKnown RBP13.01□□□□□ -0.33
XRCC3-212ENST00000555231 TBC1D10AQ9BXI6 508 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 ZWILCHQ9H900 591 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 NT5MQ9NPB1 228 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 TBC1D29Q9UFV1 150 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 PPIL1Q9Y3C6 166 aa13.01□□□□□ -0.33
XRCC3-212ENST00000555231 OAS3Q9Y6K5 1087 aaKnown RBP13.01□□□□□ -0.33
XRCC3-212ENST00000555231 TNRC6AQ8NDV7 1962 aaKnown RBP13□□□□□ -0.33
XRCC3-212ENST00000555231 LGALS16A8MUM7 142 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 H3BRJ5 948 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 POLR1CO15160 346 aaPredicted RBP13□□□□□ -0.33
XRCC3-212ENST00000555231 DNAJC6O75061 913 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 ACP5P13686 325 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 TCF4P15884 667 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 ZNF28P17035 718 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 IL1R2P27930 398 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 ARL4AP40617 200 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 MMP13P45452 471 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 MC1RQ01726 317 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 ITKQ08881 620 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 LRP8Q14114 963 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 MARC1Q5VT66 337 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 WDR74Q6RFH5 385 aaPredicted RBP13□□□□□ -0.33
XRCC3-212ENST00000555231 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 IRF2BP2Q7Z5L9 587 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 ATPAF2Q8N5M1 289 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 NSMCE1Q8WV22 266 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 HSPH1Q92598 858 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 PSMG3-AS1Q96PY0 264 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 ZPBPQ9BS86 351 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 SYT11Q9BT88 431 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 TRIT1Q9H3H1 467 aaKnown RBP13□□□□□ -0.33
XRCC3-212ENST00000555231 STN1Q9H668 368 aaKnown RBP13□□□□□ -0.33
XRCC3-212ENST00000555231 SARS2Q9NP81 518 aaKnown RBP13□□□□□ -0.33
XRCC3-212ENST00000555231 CNOT8Q9UFF9 292 aaKnown RBP13□□□□□ -0.33
XRCC3-212ENST00000555231 LIMA1Q9UHB6 759 aaKnown RBP13□□□□□ -0.33
XRCC3-212ENST00000555231 RPS6KL1Q9Y6S9 549 aa13□□□□□ -0.33
XRCC3-212ENST00000555231 USP9YO00507 2555 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms