RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 POLE3Q9NRF9 147 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TUBG2Q9NRH3 451 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DDX28Q9NUL7 540 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MIOSQ9NXC5 875 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TAB2Q9NYJ8 693 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PKD2L2Q9NZM6 624 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LARSQ9P2J5 1176 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 WRAP73Q9P2S5 460 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 IPO11Q9UI26 975 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RUVBL1Q9Y265 456 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MYH11P35749 1972 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CACNA1HO95180 2353 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 DOCK6Q96HP0 2047 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 OTOGLQ3ZCN5 2332 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 A0A0U1RQJ8 604 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 LOC100506127A0A0U1RQW1 187 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 A8MX80 341 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 F5H0A9 414 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 J3QW42 95 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 K7ESF4 209 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GTPBP1O00178 669 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 NDUFS8O00217 210 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 EML1O00423 815 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 DVL2O14641 736 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PTGESO14684 152 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PAGE1O75459 146 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 KRT37O76014 449 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CRTAMO95727 393 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 HRGP04196 525 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TYMPP19971 482 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CYP2A7P20853 494 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 C5AR1P21730 350 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PROZP22891 400 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GLRA2P23416 452 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 HTR1BP28222 390 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MARCKSP29966 332 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 YWHABP31946 246 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GPC1P35052 558 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PBX3P40426 434 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 AARSP49588 968 aaKnown RBP eCLIP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 STARP49675 285 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GDI2P50395 445 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF41P51814 821 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ARF5P84085 180 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 OCRLQ01968 901 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ALDH6A1Q02252 535 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FCHO2Q0JRZ9 810 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ST3GAL1Q11201 340 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 DCTN2Q13561 401 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 STIM1Q13586 685 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CAPSQ13938 189 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 POU4F3Q15319 338 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 BCL2A1Q16548 175 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ARHGAP15Q53QZ3 475 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CFAP157Q5JU67 520 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 KCNT1Q5JUK3 1230 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FAXCQ5TGI0 409 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 KANK2Q63ZY3 851 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GALNT18Q6P9A2 607 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PARM1Q6UWI2 310 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 LRRC31Q6UY01 552 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MACC1Q6ZN28 852 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PXKQ7Z7A4 578 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FAM124AQ86V42 546 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 LONP2Q86WA8 852 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 RHPN2Q8IUC4 686 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 DENND1CQ8IV53 801 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MCEMP1Q8IX19 187 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ST13P4Q8IZP2 240 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CADM3Q8N126 398 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MIER2Q8N344 545 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 SPEM1Q8N4L4 309 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 OR1N1Q8NGS0 311 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FEZF2Q8TBJ5 459 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TRPC4APQ8TEL6 797 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ABHD17AQ96GS6 310 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM68Q96MH6 324 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GORASP1Q9BQQ3 440 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TBCDQ9BTW9 1192 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MLPHQ9BV36 600 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TIPINQ9BVW5 301 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 EIF2AQ9BY44 585 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MRPL4Q9BYD3 311 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GPR62Q9BZJ7 368 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 SHCBP1LQ9BZQ2 653 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 RNF32Q9H0A6 362 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM60Q9H2L4 133 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PDZD7Q9H5P4 517 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 LATS2Q9NRM7 1088 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM160Q9NX00 188 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 DDX43Q9NXZ2 648 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 WWOXQ9NZC7 414 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MBD2Q9UBB5 411 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 DNAI1Q9UI46 699 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 LCMT1Q9UIC8 334 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CAPN11Q9UMQ6 739 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 WASF3Q9UPY6 502 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GAB2Q9UQC2 676 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MTMR6Q9Y217 621 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 SLC22A14Q9Y267 594 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms