RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PIGTQ969N2 578 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 MAELQ96JY0 434 aaKnown RBP3.84□□□□□ -1.79
SCFD1-210ENST00000553693 MPHOSPH8Q99549 860 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 LBHD1Q9BQE6 289 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-210ENST00000553693 BARHL1Q9BZE3 327 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 TKTL2Q9H0I9 626 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 PPCSQ9HAB8 311 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 VEZTQ9HBM0 779 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 KCND2Q9NZV8 630 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 OR2W1Q9Y3N9 320 aa3.84□□□□□ -1.79
SCFD1-210ENST00000553693 CFTRP13569 1480 aa3.84□□□□□ -1.8
SCFD1-210ENST00000553693 GREB1LQ9C091 1923 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 LRRC53A6NM62 1247 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 SPINT2O43291 252 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 FTCDO95954 541 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 EGFP01133 1207 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 HNRNPA1P09651 372 aaKnown RBP eCLIP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 FGF5P12034 268 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 POLR2CP19387 275 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 HSD17B4P51659 736 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 LINC01547P58512 204 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 GALNT2Q10471 571 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 CCDC96Q2M329 555 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 USP41Q3LFD5 358 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 TMEM35AQ53FP2 167 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 HIST2H2BCQ6DN03 193 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 SIGIRRQ6IA17 410 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 BRAT1Q6PJG6 821 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 ZNF704Q6ZNC4 412 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 CACNA2D4Q7Z3S7 1137 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 CTCFLQ8NI51 663 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 ORAI1Q96D31 301 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 ZBTB10Q96DT7 871 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 PABPC5Q96DU9 382 aaKnown RBP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 ALG14Q96F25 216 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 SCLT1Q96NL6 688 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 POLR3CQ9BUI4 534 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 DDX43Q9NXZ2 648 aaKnown RBP3.83□□□□□ -1.8
SCFD1-210ENST00000553693 CEPT1Q9Y6K0 416 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 DGKBQ9Y6T7 804 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 PTPRCP08575 1304 aa3.83□□□□□ -1.8
SCFD1-210ENST00000553693 WIZO95785 1651 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 IFT140Q96RY7 1462 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 LDLRAD4O15165 306 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 ZNHIT1O43257 154 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 PEX14O75381 377 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 LDLRP01130 860 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 INHBAP08476 426 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 ABCD1P33897 745 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 PAFAH1B1P43034 410 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 TAS2R38P59533 333 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 FCN2Q15485 313 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 TMEM30BQ3MIR4 351 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 SLC9B1Q4ZJI4 515 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 STXBP5Q5T5C0 1151 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 SLC35E4Q6ICL7 350 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 CEACAM20Q6UY09 585 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 CYP26C1Q6V0L0 522 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 GPR180Q86V85 440 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 SCRN2Q96FV2 425 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 APOPT1Q96IL0 206 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 UBXN10Q96LJ8 280 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 F2RL3Q96RI0 385 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 EIF2AK1Q9BQI3 630 aaKnown RBP3.82□□□□□ -1.8
SCFD1-210ENST00000553693 TMEM47Q9BQJ4 181 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 CHMP4AQ9BY43 222 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 GLIS2Q9BZE0 524 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-210ENST00000553693 BRF2Q9HAW0 419 aa3.82□□□□□ -1.8
SCFD1-210ENST00000553693 MAP3K20Q9NYL2 800 aaKnown RBP3.82□□□□□ -1.8
SCFD1-210ENST00000553693 AQRO60306 1485 aaKnown RBP eCLIP3.81□□□□□ -1.82e-7■□□□□ 8.7
SCFD1-210ENST00000553693 RSF1Q96T23 1441 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-210ENST00000553693 ANTXRLA6NF34 631 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 VCYO14598 125 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 IGHV4-39P01824 125 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 TUBBP07437 444 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 FAM106CPP0CH98 169 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 CPOXP36551 454 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 NR0B1P51843 470 aaKnown RBP3.81□□□□□ -1.8
SCFD1-210ENST00000553693 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 ISL1P61371 349 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 TUBB4BP68371 445 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 NEXNQ0ZGT2 675 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 DRAP1Q14919 205 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-210ENST00000553693 BAK1Q16611 211 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 GSTA3Q16772 222 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 MYLK3Q32MK0 819 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 ZNF876PQ49A33 203 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 HIST2H2BDQ6DRA6 164 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 HAPLN4Q86UW8 402 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 KLHDC9Q8NEP7 349 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 CADM4Q8NFZ8 388 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 OR10V1Q8NGI7 309 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 THAP6Q8TBB0 222 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 SLC38A5Q8WUX1 472 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 DNAAF4Q8WXU2 420 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 TAAR8Q969N4 342 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 SAAL1Q96ER3 474 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 ST6GAL2Q96JF0 529 aa3.81□□□□□ -1.8
SCFD1-210ENST00000553693 HARBI1Q96MB7 349 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms