RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 LRIT1Q9P2V4 623 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 LCMT1Q9UIC8 334 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 ACACAQ13085 2346 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 D6RAR5 112 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 B4GAT1O43505 415 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 PSTPIP1O43586 416 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 FECHP22830 423 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 KELP23276 732 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 SPINT3P49223 89 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 OR1D5P58170 312 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 HENMT1Q5T8I9 393 aaKnown RBP18.11■□□□□ 0.49
SHMT2-206ENST00000553529 NKAIN2Q5VXU1 208 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 SPRED1Q7Z699 444 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 NT5DC3Q86UY8 548 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 CCNJLQ8IV13 435 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 ZDHHC1Q8WTX9 485 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 SCG3Q8WXD2 468 aaKnown RBP18.11■□□□□ 0.49
SHMT2-206ENST00000553529 GLMNQ92990 594 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 NAT6Q93015 286 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 OXNAD1Q96HP4 312 aaPredicted RBP18.11■□□□□ 0.49
SHMT2-206ENST00000553529 MRFAP1L1Q96HT8 127 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 LYSMD1Q96S90 227 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 MLPHQ9BV36 600 aaPredicted RBP18.11■□□□□ 0.49
SHMT2-206ENST00000553529 LRRN3Q9H3W5 708 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 POLR1BQ9H9Y6 1135 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 BPIFA1Q9NP55 256 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 PACSIN2Q9UNF0 486 aaPredicted RBP18.11■□□□□ 0.49
SHMT2-206ENST00000553529 ZNF711Q9Y462 761 aa18.11■□□□□ 0.49
SHMT2-206ENST00000553529 EPN1Q9Y6I3 576 aaPredicted RBP18.11■□□□□ 0.49
SHMT2-206ENST00000553529 ANKRD11Q6UB99 2663 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-206ENST00000553529 ZFYVE26Q68DK2 2539 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 PPP1R12AO14974 1030 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-206ENST00000553529 BUD23O43709 281 aaKnown RBP18.1■□□□□ 0.49
SHMT2-206ENST00000553529 DNAJC6O75061 913 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 MTX2O75431 263 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 ASMTLO95671 621 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 ZNF30P17039 623 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 MPSTP25325 297 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 ACTR1BP42025 376 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 ACTR1AP61163 376 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 SRSF6Q13247 344 aaKnown RBP18.1■□□□□ 0.49
SHMT2-206ENST00000553529 PLA2G4EQ3MJ16 856 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 AMZ1Q400G9 498 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 KHDC1Q4VXA5 237 aaKnown RBP18.1■□□□□ 0.49
SHMT2-206ENST00000553529 PYCR3Q53H96 274 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 TEX44Q53QW1 395 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 C11orf63Q6NUN7 778 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 DAAM2Q86T65 1068 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 SPACA3Q8IXA5 215 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 KATNAL2Q8IYT4 538 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 ZNF567Q8N184 647 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 ARL14Q8N4G2 192 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 SLC25A41Q8N5S1 370 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 SPC24Q8NBT2 197 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 SNIP1Q8TAD8 396 aaKnown RBP18.1■□□□□ 0.49
SHMT2-206ENST00000553529 NAT14Q8WUY8 206 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 ALG3Q92685 438 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 FGF11Q92914 225 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 HIC2Q96JB3 615 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 OR2M4Q96R27 311 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 GFM1Q96RP9 751 aaKnown RBP18.1■□□□□ 0.49
SHMT2-206ENST00000553529 SLC25A51Q9H1U9 297 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 SEMA6CQ9H3T2 930 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 EVA1BQ9NVM1 165 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 NCKIPSDQ9NZQ3 722 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 TMEM9Q9P0T7 183 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 AMACRQ9UHK6 382 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 KCNK6Q9Y257 313 aa18.1■□□□□ 0.49
SHMT2-206ENST00000553529 GRID2IPA4D2P6 1211 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 PPM1DO15297 605 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 IVLP07476 585 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 ITIH1P19827 911 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 ETV5P41161 510 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 ABCG1P45844 678 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 LSSP48449 732 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 B4GALNT1Q00973 533 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 PTPRCAPQ14761 206 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 SPA17Q15506 151 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 ODF2Q5BJF6 829 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 KDELC1Q6UW63 502 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 USP53Q70EK8 1073 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 ZNF765Q7L2R6 523 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 VSIG1Q86XK7 387 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 TFB1MQ8WVM0 346 aaKnown RBP18.09■□□□□ 0.49
SHMT2-206ENST00000553529 SCARF2Q96GP6 870 aaPredicted RBP18.09■□□□□ 0.49
SHMT2-206ENST00000553529 TEKT5Q96M29 485 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 PANX2Q96RD6 677 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 NUDT22Q9BRQ3 303 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 TMPRSS11EQ9UL52 423 aa18.09■□□□□ 0.49
SHMT2-206ENST00000553529 ZFC3H1O60293 1989 aaKnown RBP18.09■□□□□ 0.49
SHMT2-206ENST00000553529 A0A0A6YYK5 440 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-206ENST00000553529 GLB1P16278 677 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 ZFXP17010 805 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-206ENST00000553529 CES1P23141 567 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 TEAD1P28347 426 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 RBL1P28749 1068 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 CYLC1P35663 651 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-206ENST00000553529 CFHR1Q03591 330 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 TLE3Q04726 772 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 CDK18Q07002 472 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms