RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ENDOD1O94919 500 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 RHOBTB3O94955 611 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 NDUFA10O95299 355 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 VNN1O95497 513 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 ECEL1O95672 775 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 F9P00740 461 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 IGHEP01854 428 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 PLEKP08567 350 aaPredicted RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 SETSIPP0DME0 302 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 CCNB1P14635 433 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 RRM1P23921 792 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 CASP4P49662 377 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 NUMBP49757 651 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 SMSP52788 366 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 CDH4P55283 916 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 MAZP56270 477 aaKnown RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 SUMO1P63165 101 aaKnown RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 MTM1Q13496 603 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 PIN1Q13526 163 aaPredicted RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 VWA5B1Q5TIE3 1220 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 CXorf57Q6NSI4 855 aaKnown RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 LRFN4Q6PJG9 635 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 IGFL3Q6UXB1 125 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 BEND5Q7L4P6 421 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 BHLHA9Q7RTU4 235 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 SETD3Q86TU7 594 aaPredicted RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 BIVMQ86UB2 503 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 PLXDC1Q8IUK5 500 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 CEP97Q8IW35 865 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 C12orf56Q8IXR9 622 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 TP53I13Q8NBR0 393 aaPredicted RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 FDCSPQ8NFU4 85 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 NCSTNQ92542 709 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 MYEOVQ96EZ4 313 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 PLPPR2Q96GM1 343 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 HSFY1Q96LI6 401 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 FCRL4Q96PJ5 515 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 FOXC2Q99958 501 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 OSBPL1AQ9BXW6 950 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 TMEM168Q9H0V1 697 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 EPB41L1Q9H4G0 881 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 APMAPQ9HDC9 416 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 LHX9Q9NQ69 397 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 SPATS2LQ9NUQ6 558 aaKnown RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 TRNAU1APQ9NX07 287 aaKnown RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 DNAJB12Q9NXW2 375 aaKnown RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 FRRS1LQ9P0K9 344 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 FARSAQ9Y285 508 aaKnown RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 NEU2Q9Y3R4 380 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 OR51B4Q9Y5P0 310 aa5.16□□□□□ -1.58
CKAP4-203ENST00000553039 MN1Q10571 1320 aaPredicted RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 PRRC2CQ9Y520 2896 aaKnown RBP5.16□□□□□ -1.58
CKAP4-203ENST00000553039 TP53BP1Q12888 1972 aaPredicted RBP5.15□□□□□ -1.58
CKAP4-203ENST00000553039 RTTNQ86VV8 2226 aa5.15□□□□□ -1.58
CKAP4-203ENST00000553039 ABCA4P78363 2273 aa5.15□□□□□ -1.58
CKAP4-203ENST00000553039 CXorf51AA0A1B0GTR3 108 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 LRRIQ3A6PVS8 624 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 FAM171A2A8MVW0 826 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 F5H423 210 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 K7ERQ8 282 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 AREL1O15033 823 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 TOX3O15405 576 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 THAP12O43422 761 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 DNAJC8O75937 253 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 KIAA0754O94854 1291 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 TMEM63AO94886 807 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 HLA-DRAP01903 254 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 RHOCP08134 193 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 VDRP11473 427 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 CD33P20138 364 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 AGAP20933 346 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 CCR1P32246 355 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 PIK3CAP42336 1068 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 NEK4P51957 841 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 PMS1P54277 932 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 RAD23BP54727 409 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 CASP6P55212 293 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 GEMIN4P57678 1058 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 KRTAP10-9P60411 292 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 YWHAEP62258 255 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 SNRPD1P62314 119 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 ELP6Q0PNE2 266 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 AUHQ13825 339 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 POLD3Q15054 466 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 WSCD2Q2TBF2 565 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 MYLK3Q32MK0 819 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 TMEM52BQ4KMG9 183 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 CRB2Q5IJ48 1285 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 MIIPQ5JXC2 388 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 ACBD5Q5T8D3 534 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 YOD1Q5VVQ6 348 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 SPOPLQ6IQ16 392 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 FBXL22Q6P050 247 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 C22orf39Q6P5X5 142 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 LRRC31Q6UY01 552 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 PASD1Q8IV76 773 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 SLC4A11Q8NBS3 891 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 UBA3Q8TBC4 463 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 HCAR2Q8TDS4 363 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms