RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 NAPAP54920 295 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PKNOX1P55347 436 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ACTR2P61160 394 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DYNLL1P63167 89 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TNFAIP2Q03169 654 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 RIPPLY1Q0D2K3 151 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 BFSP1Q12934 665 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TNK1Q13470 666 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 KRR1Q13601 381 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CHRNA2Q15822 529 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DGUOKQ16854 277 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ADPRMQ3LIE5 342 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SLC9B1Q4ZJI4 515 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CLVS2Q5SYC1 327 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TREML2Q5T2D2 321 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PRAMEF13Q5VWM6 474 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 RSBN1Q5VWQ0 802 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 STEAP3Q658P3 488 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SLC9A4Q6AI14 798 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PNCKQ6P2M8 343 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NEK5Q6P3R8 708 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 XKRXQ6PP77 449 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NSMFQ6X4W1 530 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 C1orf186Q6ZWK4 172 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 FAM214BQ7L5A3 538 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 STRADAQ7RTN6 431 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 GSTA5Q7RTV2 222 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF720Q7Z2F6 126 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 MRPL10Q7Z7H8 261 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SLC51AQ86UW1 340 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SLC47A2Q86VL8 602 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF677Q86XU0 584 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PHF13Q86YI8 300 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 RHPN2Q8IUC4 686 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SNX29P2Q8IUI4 249 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PALM2Q8IXS6 379 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PDIK1LQ8N165 341 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 METTL4Q8N3J2 472 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 LILRB2Q8N423 598 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CBR4Q8N4T8 237 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CCDC185Q8N715 623 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF781Q8N8C0 355 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TP53I13Q8NBR0 393 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 MCUQ8NE86 351 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 OR4M2Q8NGB6 313 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 OR4M1Q8NGD0 313 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 OR2T34Q8NGX1 318 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 BLOC1S5Q8TDH9 187 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SMG7Q92540 1137 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NCLNQ969V3 563 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 RCN3Q96D15 328 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 LRRC39Q96DD0 335 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 RTP4Q96DX8 246 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NRBF2Q96F24 287 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CENPNQ96H22 339 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 FBXL20Q96IG2 436 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ELMO2Q96JJ3 720 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SIGLEC10Q96LC7 697 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 OR52B2Q96RD2 323 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SECISBP2Q96T21 854 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DPH2Q9BQC3 489 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 SENP7Q9BQF6 1050 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM47Q9BQJ4 181 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 MTG1Q9BT17 334 aaPredicted RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 C9orf16Q9BUW7 83 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DUSP23Q9BVJ7 150 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TRIM15Q9C019 465 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DSN1Q9H410 356 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NOL6Q9H6R4 1146 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 BCAS3Q9H6U6 928 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NIPAL2Q9H841 368 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NOL11Q9H8H0 719 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 COG4Q9H9E3 785 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 MRM3Q9HC36 420 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ZBTB26Q9HCK0 441 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 NGRNQ9NPE2 291 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 HOMER2Q9NSB8 354 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 MRGBPQ9NV56 204 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ADPRHL2Q9NX46 363 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 DCAF16Q9NXF7 216 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM216Q9P0N5 145 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ANAPC7Q9UJX3 599 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PACSIN3Q9UKS6 424 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 BAG5Q9UL15 447 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 ZBTB21Q9ULJ3 1066 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 VPS4AQ9UN37 437 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 TRAPPC4Q9Y296 219 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 PCDHB14Q9Y5E9 798 aa5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 RBBP6Q7Z6E9 1792 aaKnown RBP5.29□□□□□ -1.56
LSM3P2-201ENST00000551246 MYH14Q7Z406 1995 aaKnown RBP5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 ARPC4-TTLL3A0A0A6YYG9 625 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 LINC00854A0A1B0GVQ3 168 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 GOLGA8IPA6NC78 632 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 PRORSD1PA6NEY8 169 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM191CA6NGB0 347 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 AGAP5A6NIR3 686 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 MEIS3P2A8K0S8 358 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 UPK3BL1B0FP48 263 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 UPK3BL2E5RIL1 263 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms