RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CNGA3Q16281 694 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 IGF2-ASQ6U949 168 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 NPNTQ6UXI9 565 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 BZW1Q7L1Q6 419 aaKnown RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 ZNF572Q7Z3I7 529 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 CCNJLQ8IV13 435 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 PELI3Q8N2H9 469 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 FBXO39Q8N4B4 442 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 LIN37Q96GY3 246 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 LGR4Q9BXB1 951 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 DPH1Q9BZG8 443 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 STRADBQ9C0K7 418 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 TMEM168Q9H0V1 697 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 LRRN3Q9H3W5 708 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 DPEP2Q9H4A9 486 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 DGKBQ9Y6T7 804 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 KNTC1P50748 2209 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.39□□□□□ -0.27
NUP188-211ENST00000550219 PRSS38A1L453 326 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 ERVH48-1M5A8F1 160 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 PLD2O14939 933 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 URI1O94763 535 aaPredicted RBP13.39□□□□□ -0.27
NUP188-211ENST00000550219 ZIC2O95409 532 aaPredicted RBP13.39□□□□□ -0.27
NUP188-211ENST00000550219 ITGA2BP08514 1039 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 MX2P20592 715 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 VIPR1P32241 457 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 OTUD4Q01804 1114 aaKnown RBP13.39□□□□□ -0.27
NUP188-211ENST00000550219 CFHR1Q03591 330 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 VAC14Q08AM6 782 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 NSUN2Q08J23 767 aaKnown RBP eCLIP13.39□□□□□ -0.27
NUP188-211ENST00000550219 TRAF2Q12933 501 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 XRCC4Q13426 336 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 NOMO1Q15155 1222 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 MAP9Q49MG5 647 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 PCSK4Q6UW60 755 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 RAB11FIP2Q7L804 512 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 HEATR4Q86WZ0 1026 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 BBS5Q8N3I7 341 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 PGBD5Q8N414 524 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 PRELID2Q8N945 189 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 GPR156Q8NFN8 814 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 CCL4L1Q8NHW4 92 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 SLC35B2Q8TB61 432 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 ACTL9Q8TC94 416 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 NSMCE1Q8WV22 266 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 P3H4Q92791 437 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 ZNF599Q96NL3 588 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 TSGA13Q96PP4 275 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 CARS2Q9HA77 564 aaKnown RBP13.39□□□□□ -0.27
NUP188-211ENST00000550219 PISDQ9UG56 409 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 R3HDM2Q9Y2K5 976 aaKnown RBP13.39□□□□□ -0.27
NUP188-211ENST00000550219 HEY1Q9Y5J3 304 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 MRFAP1Q9Y605 127 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 RNF215Q9Y6U7 377 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 SHROOM3Q8TF72 1996 aa13.39□□□□□ -0.27
NUP188-211ENST00000550219 NOBOXO60393 691 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 SOCS5O75159 536 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 JMJD7P0C870 316 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 MYCLP1P12525 358 aaPredicted RBP13.38□□□□□ -0.27
NUP188-211ENST00000550219 CTPS1P17812 591 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 UGT1A5P35504 534 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 HSPA9P38646 679 aaKnown RBP13.38□□□□□ -0.27
NUP188-211ENST00000550219 GARSP41250 739 aaKnown RBP13.38□□□□□ -0.27
NUP188-211ENST00000550219 PAFAH1B1P43034 410 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 MMP13P45452 471 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 MAZP56270 477 aaKnown RBP13.38□□□□□ -0.27
NUP188-211ENST00000550219 RHDQ02161 417 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 CLN3Q13286 438 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 ARHGEF7Q14155 803 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 PDK1Q15118 436 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 PTPRRQ15256 657 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 CCNG2Q16589 344 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 WHAMMP3Q1A5X7 153 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 C14orf28Q4W4Y0 310 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 CERCAMQ5T4B2 595 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 CCDC181Q5TID7 509 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 KIAA1614Q5VZ46 1190 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 RAET1GQ6H3X3 334 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 PNCKQ6P2M8 343 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 DRICH1Q6PGQ1 229 aaPredicted RBP13.38□□□□□ -0.27
NUP188-211ENST00000550219 DOK6Q6PKX4 331 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 CLEC14AQ86T13 490 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 ZNF843Q8N446 348 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.38□□□□□ -0.27
NUP188-211ENST00000550219 OR6C4Q8NGE1 309 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 FATE1Q969F0 183 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 HAUS1Q96CS2 278 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 HDAC11Q96DB2 347 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 COQ10AQ96MF6 247 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 TMEM74Q96NL1 305 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms