RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 NFYCQ13952 458 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 PYCR3Q53H96 274 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 ALFQ53S48 1182 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 CYBRD1Q53TN4 286 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 PAGE3Q5JUK9 113 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 IRAK1BP1Q5VVH5 260 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 KANK2Q63ZY3 851 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 XKR5Q6UX68 686 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 ANKRD23Q86SG2 305 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 PGBD5Q8N414 524 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 SMOC2Q9H3U7 446 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 HIPK3Q9H422 1215 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 ALG2Q9H553 416 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 SLC52A3Q9NQ40 469 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 ABCC13Q9NSE7 274 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 A0A1W2PQH9 124 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 SH3PXD2BA1X283 911 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 C17orf102A2RUQ5 167 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 NCF1BA6NI72 391 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 NCF1CA8MVU1 366 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 NCF1P14598 390 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 LBPP18428 481 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 FDXRP22570 491 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 EEF1DP29692 281 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 PRDX3P30048 256 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 GRIK1P39086 918 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 BNIP2Q12982 314 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 AARS2Q5JTZ9 985 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 PRMT9Q6P2P2 845 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 BLOC1S3Q6QNY0 202 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 TBPL2Q6SJ96 375 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 AGMOQ6ZNB7 445 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 KCTD8Q6ZWB6 473 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 OR13C4Q8NGS5 318 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 SEPT8Q92599 483 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 PPP1R2P1Q96PQ5 205 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 ZNF408Q9H9D4 720 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 GID8Q9NWU2 228 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 IKZF3Q9UKT9 509 aa14.09□□□□□ -0.15
RAPGEF3-218ENST00000548919 ITGB1P05556 798 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ODC1P11926 461 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZNF37AP17032 561 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 LIPEQ05469 1076 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 SPRED1Q7Z699 444 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZNF554Q86TJ5 538 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 TRIM74Q86UV6 250 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 TRIM73Q86UV7 250 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 CIR1Q86X95 450 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 DCBLD1Q8N8Z6 715 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 GABPB2Q8TAK5 448 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 THAP11Q96EK4 314 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 VPS50Q96JG6 964 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 KCTD14Q9BQ13 255 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ACBD6Q9BR61 282 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 C1orf50Q9BV19 199 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 PAIP1Q9H074 479 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZNF510Q9Y2H8 683 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 CCDC162PA2VCL2 907 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 SUPT3HB4E1H0 165 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 CD3EAPO15446 510 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 SUPT3HO75486 399 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 FGF4P08620 206 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ATXN1LP0C7T5 689 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 MLLT6P55198 1093 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 GALNT3Q14435 633 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 POLD3Q15054 466 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZIK1Q3SY52 487 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 OTUD3Q5T2D3 398 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ABRAXAS1Q6UWZ7 409 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 RAB44Q7Z6P3 723 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 DHRSXQ8N5I4 330 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ADAMTS16Q8TE57 1224 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 GFM2Q969S9 779 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ESAMQ96AP7 390 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 SP110Q9HB58 689 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 FLRT1Q9NZU1 646 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 HACD3Q9P035 362 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 PTBP2Q9UKA9 531 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 FAM50BQ9Y247 325 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZNF711Q9Y462 761 aa14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 OAS3Q9Y6K5 1087 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-218ENST00000548919 TCRBV5S2A0A599 114 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 TRIM64A6NGJ6 449 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 BOLA2-SMG1P6H3BVE0 249 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZSCAN9O15535 394 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 CRCPO75575 148 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 PAPSS2O95340 614 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 GLP2RO95838 553 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 RFC2P35250 354 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 POLR2IP36954 125 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 RPS9P46781 194 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 NAA20P61599 178 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 UFM1P61960 85 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 CLCQ05315 142 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 HABP4Q5JVS0 413 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 TMTC4Q5T4D3 741 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 SCN4BQ8IWT1 228 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 KIAA2013Q8IYS2 634 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 DCP1BQ8IZD4 617 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms