RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TBATAQ96M53 351 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 ATOH8Q96SQ7 321 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 UNKQ9C0B0 810 aaKnown RBP23.18■■□□□ 1.3
FOXA1-202ENST00000545425 NLE1Q9NVX2 485 aaPredicted RBP23.18■■□□□ 1.3
FOXA1-202ENST00000545425 POLR3BQ9NW08 1133 aaPredicted RBP23.18■■□□□ 1.3
FOXA1-202ENST00000545425 MARCH4Q9P2E8 410 aaPredicted RBP23.18■■□□□ 1.3
FOXA1-202ENST00000545425 SEPT3Q9UH03 358 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 NUDT5Q9UKK9 219 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 LCHNA4D1U4 455 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 HNRNPRO43390 633 aaKnown RBP23.17■■□□□ 1.3
FOXA1-202ENST00000545425 PLK1P53350 603 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 LCP2Q13094 533 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 IKBKEQ14164 716 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 MRPL58Q14197 206 aaKnown RBP23.17■■□□□ 1.3
FOXA1-202ENST00000545425 NKAPQ8N5F7 415 aaKnown RBP23.17■■□□□ 1.3
FOXA1-202ENST00000545425 IGSF8Q969P0 613 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 PTERQ96BW5 349 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 CNBD2Q96M20 576 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 MGME1Q9BQP7 344 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 PDFQ9HBH1 243 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 TNFRSF12AQ9NP84 129 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 SDR39U1Q9NRG7 319 aaPredicted RBP23.17■■□□□ 1.3
FOXA1-202ENST00000545425 TAS2R13Q9NYV9 303 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 NOD1Q9Y239 953 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 COMMD10Q9Y6G5 202 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 CDK14O94921 469 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 PYGLP06737 847 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 OR4Q2P0C623 313 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 OR1E1P30953 314 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 MYBPC1Q00872 1141 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 PPP1R3AQ16821 1122 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 VARS2Q5ST30 1063 aaKnown RBP23.17■■□□□ 1.3
FOXA1-202ENST00000545425 RAP1GAP2Q684P5 730 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 ZNF549Q6P9A3 640 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 CYHR1Q6ZMK1 362 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 SATL1Q86VE3 508 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 HERC6Q8IVU3 1022 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 TWIST2Q8WVJ9 160 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 FAM193BQ96PV7 902 aaPredicted RBP23.17■■□□□ 1.3
FOXA1-202ENST00000545425 CCDC68Q9H2F9 335 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 AKTIPQ9H8T0 292 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 TBX21Q9UL17 535 aa23.17■■□□□ 1.3
FOXA1-202ENST00000545425 A0A0J9YYE9 177 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 KANSL1LA0AUZ9 987 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 CCDC162PA2VCL2 907 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 GRXCR2A6NFK2 248 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 ANGPT2O15123 496 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 FCGR1AP12314 374 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 TUBA4AP68366 448 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 RAD51Q06609 339 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 DDR2Q16832 855 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 KIF19Q2TAC6 998 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 TMEM259Q4ZIN3 620 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 C6orf10Q5SRN2 563 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 B3GNT6Q6ZMB0 384 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 CCM2LQ9NUG4 571 aaPredicted RBP23.16■■□□□ 1.3
FOXA1-202ENST00000545425 DNAJC15Q9Y5T4 150 aa23.16■■□□□ 1.3
FOXA1-202ENST00000545425 F5H5T6 163 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 PDLIM1O00151 329 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 MLYCDO95822 493 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 TIMP1P01033 207 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 ZDHHC11BP0C7U3 371 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 TCN1P20061 433 aaPredicted RBP23.15■■□□□ 1.3
FOXA1-202ENST00000545425 SH3BP2P78314 561 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 SLC5A9Q2M3M2 681 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 C10orf120Q5SQS8 335 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 INTS11Q5TA45 600 aaKnown RBP23.15■■□□□ 1.3
FOXA1-202ENST00000545425 ANKS6Q68DC2 871 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 LCN8Q6JVE9 175 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 PPP4R4Q6NUP7 873 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 ERMP1Q7Z2K6 904 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 FUNDC1Q8IVP5 155 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 HM13Q8TCT9 377 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 SLC45A3Q96JT2 553 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 DNAJC1Q96KC8 554 aaKnown RBP23.15■■□□□ 1.3
FOXA1-202ENST00000545425 TRIM54Q9BYV2 358 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 MID1IP1Q9NPA3 183 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 PNPLA3Q9NST1 481 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 SLC12A8A0AV02 714 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 SOAT2O75908 522 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 SLC34A2O95436 690 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 CHEK2O96017 543 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 NPPAP01160 153 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 TACR2P21452 398 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 MSX2P35548 267 aaPredicted RBP23.15■■□□□ 1.3
FOXA1-202ENST00000545425 KCNC1P48547 511 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 SLC7A2P52569 658 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 TAF1AQ15573 450 aaPredicted RBP23.15■■□□□ 1.3
FOXA1-202ENST00000545425 CTXN3Q4LDR2 81 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 PRR23BQ6ZRT6 265 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 CARM1Q86X55 608 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 BLOC1S5Q8TDH9 187 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 CDKN2AIPNLQ96HQ2 116 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 TRIB3Q96RU7 358 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 PCDH10Q9P2E7 1040 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 CRYL1Q9Y2S2 319 aa23.15■■□□□ 1.3
FOXA1-202ENST00000545425 KLK8O60259 260 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 MTHFD2P13995 350 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 IL10P22301 178 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 ITGB8P26012 769 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms