RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TAS2R39P59534 338 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 RAB10P61026 200 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 ZKSCAN8Q15776 578 aaPredicted RBP30.3■■■□□ 2.44
CCM2-219ENST00000544363 HECTD2Q5U5R9 776 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 DYDC1Q8WWB3 177 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 LPGAT1Q92604 370 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 PLEKHG4BQ96PX9 1271 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 GABRG3Q99928 467 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 C12orf65Q9H3J6 166 aaKnown RBP30.3■■■□□ 2.44
CCM2-219ENST00000544363 ASB8Q9H765 288 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 DCDC2Q9UHG0 476 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 LOC730098B7Z3J9 87 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 GLRA3O75311 464 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 ADRB3P13945 408 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 CRABP2P29373 138 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 SLC12A2P55011 1212 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 NFATC2Q13469 925 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 CHRNA6Q15825 494 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 HABP4Q5JVS0 413 aaKnown RBP30.29■■■□□ 2.44
CCM2-219ENST00000544363 LVRNQ6Q4G3 990 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 CERS6Q6ZMG9 384 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 RAPH1Q70E73 1250 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 ERN2Q76MJ5 926 aaKnown RBP30.29■■■□□ 2.44
CCM2-219ENST00000544363 IL17RCQ8NAC3 791 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 HDAC8Q9BY41 377 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 TLK1Q9UKI8 766 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 VWA7Q9Y334 891 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 RNASEH1O60930 286 aaKnown RBP30.29■■■□□ 2.44
CCM2-219ENST00000544363 LSP1P33241 339 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 SATB1Q01826 763 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 ELP6Q0PNE2 266 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 INSCQ1MX18 579 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 SLC44A4Q53GD3 710 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 HHATQ5VTY9 493 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 FAM45BPQ6NSW5 357 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 ZNF549Q6P9A3 640 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 RFLNAQ6ZTI6 216 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 HSD11B1LQ7Z5J1 315 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 CEP97Q8IW35 865 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 GDAP1Q8TB36 358 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 FAM45AQ8TCE6 357 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 ZNF398Q8TD17 642 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 GRID1Q9ULK0 1009 aa30.29■■■□□ 2.44
CCM2-219ENST00000544363 TRBV5-4A0A0C4DH59 114 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 UBA6A0AVT1 1052 aaPredicted RBP30.28■■■□□ 2.44
CCM2-219ENST00000544363 PHGDHO43175 533 aaKnown RBP30.28■■■□□ 2.44
CCM2-219ENST00000544363 GPR39O43194 453 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 SPINT1O43278 529 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 TOP3BO95985 862 aaKnown RBP30.28■■■□□ 2.44
CCM2-219ENST00000544363 MRPS21P82921 87 aaKnown RBP30.28■■■□□ 2.44
CCM2-219ENST00000544363 TFF2Q03403 129 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 GABPB1Q06547 395 aaPredicted RBP30.28■■■□□ 2.44
CCM2-219ENST00000544363 GPR33Q49SQ1 333 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 TAF1BQ53T94 588 aaPredicted RBP30.28■■■□□ 2.44
CCM2-219ENST00000544363 LIPIQ6XZB0 460 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 TRMT11Q7Z4G4 463 aaKnown RBP30.28■■■□□ 2.44
CCM2-219ENST00000544363 PRUNE2Q8WUY3 3088 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 TSPAN17Q96FV3 270 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 FAM111AQ96PZ2 611 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 OLFM1Q99784 485 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 PAIP2Q9BPZ3 127 aaKnown RBP30.28■■■□□ 2.44
CCM2-219ENST00000544363 ITM2BQ9Y287 266 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 ANKRD6Q9Y2G4 727 aa30.28■■■□□ 2.44
CCM2-219ENST00000544363 SHISA7A6NL88 538 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 PLK4O00444 970 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 AREL1O15033 823 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 PPARGP37231 505 aaPredicted RBP30.27■■■□□ 2.44
CCM2-219ENST00000544363 ETV4P43268 484 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 IL9RQ01113 521 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 CST6Q15828 149 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 CLEC14AQ86T13 490 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 TAX1BP1Q86VP1 789 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 TTC1Q99614 292 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 AARSD1Q9BTE6 412 aaKnown RBP30.27■■■□□ 2.44
CCM2-219ENST00000544363 RAD18Q9NS91 495 aa30.27■■■□□ 2.44
CCM2-219ENST00000544363 RGSL1A5PLK6 1076 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 H0Y858 1186 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 PSMD11O00231 422 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 KLF8O95600 359 aaPredicted RBP30.26■■■□□ 2.44
CCM2-219ENST00000544363 GSTA1P08263 222 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 ELFN1P0C7U0 828 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 SLC35E2BP0CK96 405 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 PTGER3P43115 390 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 STARD3Q14849 445 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 LYPLAL1Q5VWZ2 237 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 SERPINA9Q86WD7 417 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 OR2T3Q8NH03 318 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 FAM3CQ92520 227 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 RAB7BQ96AH8 199 aa30.26■■■□□ 2.44
CCM2-219ENST00000544363 CAMSAP3Q9P1Y5 1249 aaPredicted RBP30.26■■■□□ 2.44
CCM2-219ENST00000544363 GOLGA8CPA6NN73 597 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 AGAP14A8MT82 685 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 ADAM23O75077 832 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 ADH1BP00325 375 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 DHRS4L1P0CG22 281 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 UGT1A6P19224 532 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 UGT1A1P22309 533 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 UGT1A4P22310 534 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 FMO4P31512 558 aa30.25■■■□□ 2.43
CCM2-219ENST00000544363 UGT1A3P35503 534 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms