RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 GPR27Q9NS67 375 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 SYBUQ9NX95 663 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 FKBPLQ9UIM3 349 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 ANAPC5Q9UJX4 755 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 ANKRD6Q9Y2G4 727 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 TCAF1Q9Y4C2 921 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 GLYATL1P3A0A0U1RQE8 302 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 FADS2P1A8MWK0 482 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 SMAPO00193 183 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 CACNB4O00305 520 aaPredicted RBP13.55□□□□□ -0.24
SP140-213ENST00000543928 CCL22O00626 93 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 TOR1BO14657 336 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 NDC80O14777 642 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 TP73O15350 636 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 GFRA3O60609 400 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 SYPP08247 313 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 TGM1P22735 817 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 TRIM23P36406 574 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 HADHAP40939 763 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 CTSKP43235 329 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 MAGEA3P43357 314 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 CDK3Q00526 305 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 CALCOCO2Q13137 446 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 LAMB3Q13751 1172 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 TSTD2Q5T7W7 516 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 FAM151BQ6UXP7 276 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 ADAMTSL4Q6UY14 1074 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 NLRP9Q7RTR0 991 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 HEATR4Q86WZ0 1026 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
SP140-213ENST00000543928 STYXQ8WUJ0 223 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 C19orf43Q9BQ61 176 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 ZSCAN5AQ9BUG6 496 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 LGR4Q9BXB1 951 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 TEX101Q9BY14 249 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 GDF3Q9NR23 364 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 CHRAC1Q9NRG0 131 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 PHPT1Q9NRX4 125 aaPredicted RBP13.55□□□□□ -0.24
SP140-213ENST00000543928 NLE1Q9NVX2 485 aaPredicted RBP13.55□□□□□ -0.24
SP140-213ENST00000543928 WHRNQ9P202 907 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 SNX11Q9Y5W9 270 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 WDR87Q6ZQQ6 2873 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 FRYLO94915 3013 aa13.55□□□□□ -0.24
SP140-213ENST00000543928 ADAMTS9Q9P2N4 1935 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 FAM186AA6NE01 2351 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 PCDH15Q96QU1 1955 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 SPTY2D1-AS1A0A0U1RR47 76 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 LNP1A1A4G5 178 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 SDR42E2A6NKP2 422 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 GAPDHSO14556 408 aaPredicted RBP13.54□□□□□ -0.24
SP140-213ENST00000543928 INPP4BO15327 924 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 MYCLP1P12525 358 aaPredicted RBP13.54□□□□□ -0.24
SP140-213ENST00000543928 ENGP17813 658 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 KIAA1024LP59773 190 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 PTK2BQ14289 1009 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 NFATC4Q14934 902 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 CHRNA6Q15825 494 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
SP140-213ENST00000543928 FNBP1LQ5T0N5 605 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 PDPK2PQ6A1A2 396 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 CASC4Q6P4E1 433 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 DCP2Q8IU60 420 aaKnown RBP13.54□□□□□ -0.24
SP140-213ENST00000543928 MPP5Q8N3R9 675 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 DTX3LQ8TDB6 740 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 ZNF778Q96MU6 729 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 PWWP2AQ96N64 755 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 GTPBP2Q9BX10 602 aaKnown RBP13.54□□□□□ -0.24
SP140-213ENST00000543928 FRMD8Q9BZ67 464 aaPredicted RBP13.54□□□□□ -0.24
SP140-213ENST00000543928 ZDHHC5Q9C0B5 715 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 GRHL1Q9NZI5 618 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 SLC2A6Q9UGQ3 507 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 RIMKLBQ9ULI2 386 aa13.54□□□□□ -0.24
SP140-213ENST00000543928 TP53BP1Q12888 1972 aaPredicted RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 ESYT3A0FGR9 886 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 GPR39O43194 453 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A9O60656 530 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 PRAMEF1O95521 474 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 HOXC4P09017 264 aaPredicted RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A6P19224 532 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A1P22309 533 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A4P22310 534 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 PSMA3P25788 255 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 HTR1BP28222 390 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 MC4RP32245 332 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A3P35503 534 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A5P35504 534 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 ARSDP51689 593 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 XIAPP98170 497 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 GUCY2DQ02846 1103 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 PEX6Q13608 980 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 FZD2Q14332 565 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 TRADDQ15628 312 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 HLA-BQ31612 363 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 ATP13A5Q4VNC0 1218 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 PRAMEF14Q5SWL7 426 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 IL27RAQ6UWB1 636 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms