RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 FAM169AQ9Y6X4 670 aa17.19■□□□□ 0.34
CLN6-202ENST00000538696 PSMD11O00231 422 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 HRO43593 1189 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 NDUFS2O75306 463 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 RPP40O75818 363 aaKnown RBP17.18■□□□□ 0.34
CLN6-202ENST00000538696 FAM155BO75949 473 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 ERVK-10P10266 1014 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 ADRA1DP25100 572 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 HPDP32754 393 aaPredicted RBP17.18■□□□□ 0.34
CLN6-202ENST00000538696 RPS21P63220 83 aaKnown RBP17.18■□□□□ 0.34
CLN6-202ENST00000538696 RPL6Q02878 288 aaKnown RBP17.18■□□□□ 0.34
CLN6-202ENST00000538696 PTSQ03393 145 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 MGAT5Q09328 741 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 FGL2Q14314 439 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 ZNF284Q2VY69 593 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 NEK5Q6P3R8 708 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 CYS1Q717R9 158 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 MARK2Q7KZI7 788 aaKnown RBP17.18■□□□□ 0.34
CLN6-202ENST00000538696 EXOC3L1Q86VI1 746 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 CBARPQ8N350 705 aaPredicted RBP17.18■□□□□ 0.34
CLN6-202ENST00000538696 ZBTB44Q8NCP5 570 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 BRSK1Q8TDC3 778 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 COQ10AQ96MF6 247 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 GPR63Q9BZJ6 419 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 SLC2A6Q9UGQ3 507 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 KCTD3Q9Y597 815 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 ARL5AQ9Y689 179 aa17.18■□□□□ 0.34
CLN6-202ENST00000538696 PLXNB3Q9ULL4 1909 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 IGLON5A6NGN9 336 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 LDB2O43679 373 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 BUD23O43709 281 aaKnown RBP17.17■□□□□ 0.34
CLN6-202ENST00000538696 LILRB5O75023 590 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 IGHV4-34P06331 123 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 INHBAP08476 426 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 MAT2AP31153 395 aaKnown RBP17.17■□□□□ 0.34
CLN6-202ENST00000538696 CCR5P51681 352 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 ZNF140P52738 457 aaPredicted RBP17.17■□□□□ 0.34
CLN6-202ENST00000538696 TAF1AQ15573 450 aaPredicted RBP17.17■□□□□ 0.34
CLN6-202ENST00000538696 ESRP1Q6NXG1 681 aaKnown RBP17.17■□□□□ 0.34
CLN6-202ENST00000538696 RFLNAQ6ZTI6 216 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 MICALCLQ6ZW33 695 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 SLC26A11Q86WA9 606 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 LRRC6Q86X45 466 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 DEFB119Q8N690 84 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 PRSS33Q8NF86 280 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 MZB1Q8WU39 189 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 KLK6Q92876 244 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 PCED1AQ9H1Q7 454 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 PPANQ9NQ55 473 aaKnown RBP17.17■□□□□ 0.34
CLN6-202ENST00000538696 TREX1Q9NSU2 369 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 PCDHGA2Q9Y5H1 932 aa17.17■□□□□ 0.34
CLN6-202ENST00000538696 TP53BP1Q12888 1972 aaPredicted RBP17.16■□□□□ 0.34
CLN6-202ENST00000538696 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 HEATR9A2RTY3 570 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 GOLGA8CPA6NN73 597 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 MAP3K13O43283 966 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 LATO43561 262 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 TM7SF2O76062 418 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 FSBPO95073 299 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 CRTAMO95727 393 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 CREB1P16220 341 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 ATP5DP30049 168 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 HMGCLP35914 325 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 ETV3P41162 512 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 ATP1A2P50993 1020 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 CREB5Q02930 508 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 PPARDQ03181 441 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 NAB1Q13506 487 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 PTPRCAPQ14761 206 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 ACOX1Q15067 660 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 TSTD2Q5T7W7 516 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 ZNF449Q6P9G9 518 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 KDM7AQ6ZMT4 941 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 TECPR1Q7Z6L1 1165 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 TRABD2AQ86V40 505 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 SLC41A1Q8IVJ1 513 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 TMEFF1Q8IYR6 380 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 CADM4Q8NFZ8 388 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 C1QTNF2Q9BXJ5 285 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 BPIFA1Q9NP55 256 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 C20orf96Q9NUD7 363 aaPredicted RBP17.16■□□□□ 0.34
CLN6-202ENST00000538696 IL17CQ9P0M4 197 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.16■□□□□ 0.34
CLN6-202ENST00000538696 IKBKGQ9Y6K9 419 aa17.16■□□□□ 0.34
CLN6-202ENST00000538696 MROH6A6NGR9 719 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 METTL12A8MUP2 240 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 LZTS3O60299 673 aaPredicted RBP17.15■□□□□ 0.34
CLN6-202ENST00000538696 RECQL5O94762 991 aaPredicted RBP17.15■□□□□ 0.34
CLN6-202ENST00000538696 F7P08709 466 aaPredicted RBP17.15■□□□□ 0.34
CLN6-202ENST00000538696 LPOP22079 712 aaPredicted RBP17.15■□□□□ 0.34
CLN6-202ENST00000538696 CNR2P34972 360 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 SPINT3P49223 89 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 PPP2R2AP63151 447 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 ARMC3Q5W041 872 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 PMS2CLQ68D20 193 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 KIAA0930Q6ICG6 404 aaPredicted RBP17.15■□□□□ 0.34
CLN6-202ENST00000538696 PACS1Q6VY07 963 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 Q6ZVL8 140 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 C11orf74Q86VG3 221 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 KCNMB4Q86W47 210 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms