RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 HTR7P34969 479 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 BUD31P41223 144 aaPredicted RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 BLKP51451 505 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZNF132P52740 706 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 MTAPQ13126 283 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 PACS1Q6VY07 963 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 RPAINQ86UA6 219 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZNF280BQ86YH2 543 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 LMX1AQ8TE12 382 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 SLC40A1Q9NP59 571 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 FBXL12Q9NXK8 326 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 FBXW2Q9UKT8 454 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ANGPT4Q9Y264 503 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZNF711Q9Y462 761 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 LRRC37A3O60309 1634 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 hCG_2014768A0A024R1R8 64 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 NOL4O94818 638 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ALPIP09923 528 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 CCNYL3P0C7X3 344 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 TFPIP10646 304 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 HLA-EP13747 358 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZNF8P17098 575 aaPredicted RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 FASP25445 335 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 CDH13P55290 713 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 JAM2P57087 298 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 CA9Q16790 459 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 BHLHB9Q6PI77 547 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 TSEN2Q8NCE0 465 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 PXYLP1Q8TE99 480 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 CD101Q93033 1021 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 RELTQ969Z4 430 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 MECRQ9BV79 373 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 UGT2B28Q9BY64 529 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 SEMA6AQ9H2E6 1030 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 KLHL1Q9NR64 748 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 BAZ2AQ9UIF9 1905 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 C2CD4BA6NLJ0 364 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 DDX3YO15523 660 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 DHX15O43143 795 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 CCND1P24385 295 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 NMBRP28336 390 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 LIPMQ5VYY2 423 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZNF549Q6P9A3 640 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 Q6ZVU0 165 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 OSTM1Q86WC4 334 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 DNAJB14Q8TBM8 379 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 C7orf43Q8WVR3 580 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 CDRT15Q96T59 188 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 SLC25A51Q9H1U9 297 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ERVK-5Q9HDB9 667 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ADGRA3Q8IWK6 1321 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 FAM237BA0A1B0GVD1 139 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 ATP6AP2A0A1C7CYW4 349 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 TCRBV9S1A1TA0A576 114 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 TCRBV21S2A2A0A5A6 115 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 RNF225M0QZC1 329 aaPredicted RBP5.34□□□□□ -1.56
LRP6-203ENST00000538239 MAN1A2O60476 641 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 ATP6AP2O75787 350 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 UBOX5O94941 541 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 FCGR1AP12314 374 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 ACP5P13686 325 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 CHRNB2P17787 502 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 FGFR3P22607 806 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 MLLT3P42568 568 aaPredicted RBP5.34□□□□□ -1.56
LRP6-203ENST00000538239 HSPA13P48723 471 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 MASP1P48740 699 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 C9orf64Q5T6V5 341 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 SLC30A9Q6PML9 568 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.34□□□□□ -1.562e-6■□□□□ 10.4
LRP6-203ENST00000538239 ZBTB49Q6ZSB9 765 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 CMTM8Q8IZV2 173 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 IGSF21Q96ID5 467 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 SAMD11Q96NU1 681 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 CDH19Q9H159 772 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 WDR26Q9H7D7 661 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 DNAJC11Q9NVH1 559 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 MCM8Q9UJA3 840 aa5.34□□□□□ -1.56
LRP6-203ENST00000538239 R3HDM2Q9Y2K5 976 aaKnown RBP5.34□□□□□ -1.56
LRP6-203ENST00000538239 CAB39Q9Y376 341 aaPredicted RBP5.34□□□□□ -1.56
LRP6-203ENST00000538239 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 FSCN2O14926 492 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 PEX1O43933 1283 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 LYPLA1O75608 230 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 KRT75O95678 551 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 PSMC3P17980 439 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 VHLP40337 213 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 CDKN2BP42772 138 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SQLEQ14534 574 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MAPKAPK3Q16644 382 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 LDLRAP1Q5SW96 308 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 RNASEH2BQ5TBB1 312 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 NAPRTQ6XQN6 538 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 R3HCC1LQ7Z5L2 792 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 IPCEF1Q8WWN9 437 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 PANX1Q96RD7 426 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 GAL3ST4Q96RP7 486 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 ACE2Q9BYF1 805 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 BTBD1Q9H0C5 482 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 CCDC177Q9NQR7 707 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms