RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 DSC2Q02487 901 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 DPYSL3Q14195 570 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 IFI16Q16666 785 aaKnown RBP19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PYCR3Q53H96 274 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 NKAIN2Q5VXU1 208 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 NCBP2-AS2Q69YL0 99 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ALKBH5Q6P6C2 394 aaKnown RBP19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 MARK2Q7KZI7 788 aaKnown RBP19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TRIM74Q86UV6 250 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 NRSN1Q8IZ57 195 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 EXD3Q8N9H8 876 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 OR4D9Q8NGE8 314 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CPLX3Q8WVH0 158 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 MAML1Q92585 1016 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 RBM22Q9NW64 420 aaKnown RBP eCLIP19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 KCNK4Q9NYG8 393 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 AMACRQ9UHK6 382 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TTLL3Q9Y4R7 772 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PCDHGA4Q9Y5G9 962 aa19.57■□□□□ 0.72
TNFRSF1B-204ENST00000536782 IGHV1OR21-1A0A087WYE8 117 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SLC28A2O43868 658 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CA4P22748 312 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 GJC1P36383 396 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 STC1P52823 247 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SQSTM1Q13501 440 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LRP8Q14114 963 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ATP13A4Q4VNC1 1196 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ANKRD20A8PQ5CZ79 823 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 GALNT13Q8IUC8 556 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 RAVER1Q8IY67 606 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 KCTD6Q8NC69 237 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CCDC112Q8NEF3 446 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 EXD1Q8NHP7 514 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 EXTL1Q92935 676 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 FATE1Q969F0 183 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 IQCDQ96DY2 449 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TSGA13Q96PP4 275 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TAAR9Q96RI9 348 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 AGAP2Q99490 1192 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 DPYSL5Q9BPU6 564 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ZNF670Q9BS34 389 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 FUCA2Q9BTY2 467 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 RIOK2Q9BVS4 552 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TDRD1Q9BXT4 1180 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CAPN11Q9UMQ6 739 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CHKBQ9Y259 395 aa19.56■□□□□ 0.72
TNFRSF1B-204ENST00000536782 STMND1H3BQB6 276 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 INPP4BO15327 924 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 MAP3K6O95382 1288 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ASMTLO95671 621 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 FGF3P11487 239 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CSTF2P33240 577 aaKnown RBP eCLIP19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 UBASH3AP57075 661 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 GPLD1P80108 840 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 IHHQ14623 411 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PDK2Q15119 407 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 MAP7D3Q8IWC1 876 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 AGBL5Q8NDL9 886 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ZNF564Q8TBZ8 553 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 COX14Q96I36 57 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CBX8Q9HC52 389 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LUC7L2Q9Y383 392 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PCDHGA3Q9Y5H0 932 aa19.55■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PYCARD-AS1I3L0S3 204 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CLDN7O95471 211 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PRLP01236 227 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 THRAP10827 490 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 FASLGP48023 281 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ATP1A2P50993 1020 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 RPL26P61254 145 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 NFATC3Q12968 1075 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LUZP1Q86V48 1076 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LPCAT1Q8NF37 534 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ARRDC2Q8TBH0 407 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 AHCYL2Q96HN2 611 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 FAM117AQ9C073 453 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ZMYND15Q9H091 742 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PCDH9Q9HC56 1237 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 VPS18Q9P253 973 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CTTNBP2NLQ9P2B4 639 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ZNHIT2Q9UHR6 403 aa19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 RPL26L1Q9UNX3 145 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 UBR5O95071 2799 aaPredicted RBP19.54■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TRBV23OR9-2A0A075B6M9 112 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PROSCO94903 275 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 HLA-DQB2P05538 268 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 WT1P19544 449 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 MX2P20592 715 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 MPSTP25325 297 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CSF2RBP32927 897 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PPM1FP49593 454 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TMEM71Q6P5X7 295 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SFRP1Q8N474 314 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 OR10G6Q8NH81 332 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SLC37A2Q8TED4 501 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 JPH3Q8WXH2 748 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LYSMD1Q96S90 227 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SLC38A3Q99624 504 aa19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 HEMK1Q9Y5R4 338 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1B-204ENST00000536782 COL12A1Q99715 3063 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms