RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 GLT6D1Q7Z4J2 308 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 C17orf53Q8N3J3 647 aaPredicted RBP22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 PDCD7Q8N8D1 485 aaKnown RBP22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 OR4C6Q8NH72 309 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 HIC2Q96JB3 615 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 NAP1L3Q99457 506 aaPredicted RBP22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 AP1M1Q9BXS5 423 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 CLPBQ9H078 707 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 BPIFA1Q9NP55 256 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 MRPL40Q9NQ50 206 aaKnown RBP22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 PAK5Q9P286 719 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 FEZ2Q9UHY8 353 aaPredicted RBP22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 SLC17A4Q9Y2C5 497 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 PRSS38A1L453 326 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 NEMP2A6NFY4 417 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 INPP4BO15327 924 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 FFAR2O15552 330 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 FUCA1P04066 466 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 TCP1P17987 556 aaKnown RBP22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 ACTN2P35609 894 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 CYP1B1Q16678 543 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 PAPD7Q5XG87 772 aaKnown RBP22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 TTC27Q6P3X3 843 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 RD3Q7Z3Z2 195 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 TRIM74Q86UV6 250 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 PTCD2Q8WV60 388 aaKnown RBP22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 LRRC45Q96CN5 670 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 NLGN3Q9NZ94 848 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 FTSJ1Q9UET6 329 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 ARL5AQ9Y689 179 aa22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 ARID1BQ8NFD5 2236 aaPredicted RBP22.59■■□□□ 1.21
SFSWAP-204ENST00000535399 FANCGO15287 622 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 TNFSF14O43557 240 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 SIGLEC6O43699 453 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 BUD23O43709 281 aaKnown RBP22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 LDOC1O95751 146 aaPredicted RBP22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 TNFP01375 233 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 CELA2BP08218 269 aaPredicted RBP22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 POLD2P49005 469 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 SEMA5AQ13591 1074 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 TAF1AQ15573 450 aaPredicted RBP22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 PROX2Q3B8N5 592 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 TRAM1L1Q8N609 369 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 BRSK1Q8TDC3 778 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 MAGOHBQ96A72 148 aaKnown RBP22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 CNDP2Q96KP4 475 aaKnown RBP22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 PLEKHG4BQ96PX9 1271 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 NAPGQ99747 312 aaPredicted RBP22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 SPATA16Q9BXB7 569 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 CYP4F12Q9HCS2 524 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 RAB6BQ9NRW1 208 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 TOR4AQ9NXH8 423 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 TMEM98Q9Y2Y6 226 aa22.58■■□□□ 1.21
SFSWAP-204ENST00000535399 NCOR2Q9Y618 2525 aa22.58■■□□□ 1.2
SFSWAP-204ENST00000535399 ERI2A8K979 691 aaKnown RBP22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 LMO7DNF2Z398 122 aa22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 IVLP07476 585 aa22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 GSTA5Q7RTV2 222 aa22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 FSTL5Q8N475 847 aaPredicted RBP22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 SCARF2Q96GP6 870 aaPredicted RBP22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 ZSCAN5AQ9BUG6 496 aa22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 IL26Q9NPH9 171 aa22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 OAS3Q9Y6K5 1087 aaKnown RBP22.57■■□□□ 1.2
SFSWAP-204ENST00000535399 MED19A0JLT2 244 aaPredicted RBP22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 TPP1O14773 563 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 SUN1O94901 812 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 ALPPL2P10696 532 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 CTSEP14091 401 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 PTPRCAPQ14761 206 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 KCTD19Q17RG1 926 aaPredicted RBP22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 DEFB133Q30KQ1 61 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 ZDHHC20Q5W0Z9 365 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 PDPK2PQ6A1A2 396 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 DOK6Q6PKX4 331 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 C4orf22Q6V702 233 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 SLCO6A1Q86UG4 719 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 DUSP23Q9BVJ7 150 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 TMEM168Q9H0V1 697 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 CARS2Q9HA77 564 aaKnown RBP22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 MOSPD1Q9UJG1 213 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 SUFUQ9UMX1 484 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 PKP3Q9Y446 797 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 KCTD3Q9Y597 815 aa22.56■■□□□ 1.2
SFSWAP-204ENST00000535399 C2orf81A6NN90 581 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 GAPDHSO14556 408 aaPredicted RBP22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 YY2O15391 372 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 STX7O15400 261 aaKnown RBP22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 FTH1P19P0C7X4 201 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 TPH1P17752 444 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 LPOP22079 712 aaPredicted RBP22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 COILP38432 576 aaPredicted RBP22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 SPAM1P38567 509 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 ELOCQ15369 112 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 TCEA2Q15560 299 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 LINC00523Q86TU6 105 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 FAM181AQ8N9Y4 354 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 DTX3LQ8TDB6 740 aa22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 PIH1D1Q9NWS0 290 aaKnown RBP22.55■■□□□ 1.2
SFSWAP-204ENST00000535399 TMPRSS11EQ9UL52 423 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms