RNA–Protein interactions for RNA: ENST00000531744.5

SDHD-212, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-212ENST00000531744 TRIB3Q96RU7 358 aa12.46□□□□□ -0.41
SDHD-212ENST00000531744 LYSMD1Q96S90 227 aa12.46□□□□□ -0.41
SDHD-212ENST00000531744 DNAJC7Q99615 494 aa12.46□□□□□ -0.41
SDHD-212ENST00000531744 POLR1EQ9GZS1 481 aaKnown RBP12.46□□□□□ -0.41
SDHD-212ENST00000531744 PRKAB1Q9Y478 270 aa12.46□□□□□ -0.41
SDHD-212ENST00000531744 IGHV5-10-1A0A0J9YXX1 117 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 A6NCN8 305 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 GOLGA6CA6NDK9 693 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 GOLGA6BA6NDN3 693 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 INPP4BO15327 924 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 NVLO15381 856 aaKnown RBP12.45□□□□□ -0.42
SDHD-212ENST00000531744 ATP1A1P05023 1023 aaKnown RBP12.45□□□□□ -0.42
SDHD-212ENST00000531744 GOLGA6DP0CG33 693 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 GPR1P46091 355 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 RHDQ02161 417 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 ITKQ08881 620 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 ARHGEF7Q14155 803 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 HADHQ16836 314 aaKnown RBP12.45□□□□□ -0.42
SDHD-212ENST00000531744 TSR1Q2NL82 804 aaKnown RBP12.45□□□□□ -0.42
SDHD-212ENST00000531744 AMZ1Q400G9 498 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 HENMT1Q5T8I9 393 aaKnown RBP12.45□□□□□ -0.42
SDHD-212ENST00000531744 NPNTQ6UXI9 565 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 MARK2Q7KZI7 788 aaKnown RBP12.45□□□□□ -0.42
SDHD-212ENST00000531744 ZNF765Q7L2R6 523 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 KCTD6Q8NC69 237 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 USP7Q93009 1102 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 TADA1Q96BN2 335 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 HDAC11Q96DB2 347 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 WBP1Q96G27 269 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 RNF157Q96PX1 679 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 GSDMCQ9BYG8 508 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 CEP41Q9BYV8 373 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 GOLGA6AQ9NYA3 693 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 CTTNBP2NLQ9P2B4 639 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 UVRAGQ9P2Y5 699 aa12.45□□□□□ -0.42
SDHD-212ENST00000531744 TRBV23OR9-2A0A075B6M9 112 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 IGHV1OR21-1A0A087WYE8 117 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 EIF4E1BA6NMX2 242 aaKnown RBP12.44□□□□□ -0.42
SDHD-212ENST00000531744 KCNK1O00180 336 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 PDE2AO00408 941 aaPredicted RBP12.44□□□□□ -0.42
SDHD-212ENST00000531744 CPNE6O95741 557 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 JCHAINP01591 159 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 FGF3P11487 239 aaPredicted RBP12.44□□□□□ -0.42
SDHD-212ENST00000531744 MPSTP25325 297 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 ALDH4A1P30038 563 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 MAN1A1P33908 653 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 ACTR1BP42025 376 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 SSR1P43307 286 aaKnown RBP12.44□□□□□ -0.42
SDHD-212ENST00000531744 SPINT3P49223 89 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 ACTR1AP61163 376 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 PPIDQ08752 370 aaKnown RBP12.44□□□□□ -0.42
SDHD-212ENST00000531744 ILF3Q12906 894 aaKnown RBP eCLIP12.44□□□□□ -0.42
SDHD-212ENST00000531744 PDK2Q15119 407 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.44□□□□□ -0.42
SDHD-212ENST00000531744 ZNF648Q5T619 568 aaPredicted RBP12.44□□□□□ -0.42
SDHD-212ENST00000531744 SLC9A4Q6AI14 798 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 VASH2Q86V25 355 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 JAMLQ86YT9 394 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 CCDC13Q8IYE1 715 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 BBS5Q8N3I7 341 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 LPCAT1Q8NF37 534 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 SLC35G2Q8TBE7 412 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 KIAA1524Q8TCG1 905 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 NSMCE1Q8WV22 266 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 HTR3CQ8WXA8 447 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 CCDC74BQ96LY2 380 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 OLFM3Q96PB7 478 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 OR2M4Q96R27 311 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 CCNL2Q96S94 520 aaPredicted RBP12.44□□□□□ -0.42
SDHD-212ENST00000531744 STRADBQ9C0K7 418 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 PCDH9Q9HC56 1237 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 SPTLC3Q9NUV7 552 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 KCTD5Q9NXV2 234 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 HYOU1Q9Y4L1 999 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 ADGRG1Q9Y653 693 aa12.44□□□□□ -0.42
SDHD-212ENST00000531744 NBASA2RRP1 2371 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 SNRNP200O75643 2136 aaKnown RBP12.43□□□□□ -0.42
SDHD-212ENST00000531744 FLNCQ14315 2725 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 TMX2-CTNND1H3BSU7 103 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 H2AFZP0C0S5 128 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 TMEM253P0C7T8 217 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 THRAP10827 490 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 LIPCP11150 499 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 ZNF30P17039 623 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 CD86P42081 329 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 NOP2P46087 812 aaKnown RBP12.43□□□□□ -0.42
SDHD-212ENST00000531744 LIMK2P53671 638 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 MAPK10P53779 464 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 IFI35P80217 286 aaPredicted RBP12.43□□□□□ -0.42
SDHD-212ENST00000531744 ADCY2Q08462 1091 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 SQSTM1Q13501 440 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 GALNT3Q14435 633 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 MESDQ14696 234 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 TAF1BQ53T94 588 aaPredicted RBP12.43□□□□□ -0.42
SDHD-212ENST00000531744 PHF19Q5T6S3 580 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 TIGD7Q6NT04 549 aaPredicted RBP12.43□□□□□ -0.42
SDHD-212ENST00000531744 CCDC81Q6ZN84 652 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 H2AFVQ71UI9 128 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 LYSMD3Q7Z3D4 306 aa12.43□□□□□ -0.42
SDHD-212ENST00000531744 NRSN1Q8IZ57 195 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms