RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CCDC42Q96M95 316 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 OMDQ99983 421 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 KRTAP4-12Q9BQ66 201 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC39A8Q9C0K1 460 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MAGEH1Q9H213 219 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 LRRC19Q9H756 370 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 UCKL1Q9NWZ5 548 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ANAPC7Q9UJX3 599 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SCINQ9Y6U3 715 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 COL5A1P20908 1838 aaPredicted RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 NBASA2RRP1 2371 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 LRRK1Q38SD2 2015 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 USP9YO00507 2555 aaPredicted RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 C10orf142B7Z368 130 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RASA4BC9J798 803 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 EEF2KO00418 725 aaKnown RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RGS13O14921 159 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 CASC3O15234 703 aaKnown RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 FFAR2O15552 330 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RASA4O43374 803 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 BUB1O43683 1085 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RAMP2O60895 175 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RNASEH1O60930 286 aaKnown RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ESR1P03372 595 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 H2AFZP0C0S5 128 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 CHRNA3P32297 505 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RXRGP48443 463 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ARRB1P49407 418 aaPredicted RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 SERPINH1P50454 418 aaKnown RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 PAPOLAP51003 745 aaKnown RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 TAS2R38P59533 333 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 TAS2R40P59535 323 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 TPI1P60174 286 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC25A11Q02978 314 aaKnown RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC20A2Q08357 652 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 CNTN1Q12860 1018 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 NFATC3Q12968 1075 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ILKQ13418 452 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 SERINC3Q13530 473 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ELAVL3Q14576 367 aaKnown RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 CYTH1Q15438 398 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 BOLA3Q53S33 107 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 CARD16Q5EG05 197 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 FAM182AQ5T1J6 154 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 BROXQ5VW32 411 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RETSATQ6NUM9 610 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 C22orf39Q6P5X5 142 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ARHGAP36Q6ZRI8 547 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 GK5Q6ZS86 529 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RFX8Q6ZV50 586 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 USP30Q70CQ3 517 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 H2AFVQ71UI9 128 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 POLNQ7Z5Q5 900 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLITRK4Q8IW52 837 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ARHGAP12Q8IWW6 846 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 NPWQ8N729 165 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 NIPA2Q8N8Q9 360 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 EXD3Q8N9H8 876 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 OR2T34Q8NGX1 318 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 OR6K2Q8NGY2 324 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 OR14C36Q8NHC7 312 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZNF564Q8TBZ8 553 aaPredicted RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 OR8D1Q8WZ84 308 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 HSPH1Q92598 858 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ARRDC3Q96B67 414 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 TM6SF2Q9BZW4 377 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 DEF6Q9H4E7 631 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 RETREG1Q9H6L5 497 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZNHIT6Q9NWK9 470 aaKnown RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 CTTNBP2NLQ9P2B4 639 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 IL17BQ9UHF5 180 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 IP6K2Q9UHH9 426 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 NCKAP1Q9Y2A7 1128 aa7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.07□□□□□ -1.28
TRIM53CP-201ENST00000531490 TP53BP1Q12888 1972 aaPredicted RBP7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 AHCTF1Q8WYP5 2266 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 DOPEY2Q9Y3R5 2298 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 UTP20O75691 2785 aaKnown RBP7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TBC1D3DA0A087WVF3 549 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TBC1D3IA0A087WXS9 549 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TBC1D3EA0A087X179 549 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TBC1D3KA0A087X1G2 549 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TBC1D3FA6NER0 549 aaPredicted RBP7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 LRRC72A6NJI9 287 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TMEM110-MUSTN1A8MSY1 372 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 GOLGA6L6A8MZA4 724 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TBC1D3LB9A6J9 549 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 KPNA3O00505 521 aaPredicted RBP7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 INSIG1O15503 277 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 DAPK3O43293 454 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 OPA1O60313 960 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 CSO75390 466 aaKnown RBP7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 PROSCO94903 275 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 RECKO95980 971 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TPM1P09493 284 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TMEM253P0C7T8 217 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 TBC1D3HP0C7X1 549 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 C5AR1P21730 350 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 ACP1P24666 158 aa7.06□□□□□ -1.28
TRIM53CP-201ENST00000531490 SSR1P43307 286 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms