RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 RAD18Q9NS91 495 aa5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 CD84Q9UIB8 345 aa5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 CDC23Q9UJX2 597 aa5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 PNMA8BQ9ULN7 279 aaPredicted RBP5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 FNDC3AQ9Y2H6 1198 aaKnown RBP5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 OR1A2Q9Y585 309 aa5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 PCDHGB2Q9Y5G2 931 aa5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 MRFAP1Q9Y605 127 aa5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 ARL5AQ9Y689 179 aa5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 SPTBN2O15020 2390 aa5.64□□□□□ -1.51
RPUSD4-204ENST00000530036 COL27A1Q8IZC6 1860 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TCRBV7S3A2A0A539 114 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TMEM202A6NGA9 273 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 MROH6A6NGR9 719 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 GOLGA8CPA6NN73 597 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 C2orf81A6NN90 581 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 C4orf47A7E2U8 309 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 AGAP14A8MT82 685 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 E7EVH7 732 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 H7C0S8 307 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 CACNB4O00305 520 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 DNALI1O14645 258 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TNFRSF10CO14798 259 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 SLC30A4O14863 429 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TM4SF5O14894 197 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 STX7O15400 261 aaKnown RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TTI1O43156 1089 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 BUD23O43709 281 aaKnown RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 URI1O94763 535 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 CRTAMO95727 393 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 SLC4A1P02730 911 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 CSF2P04141 144 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 CD59P13987 128 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 LPOP22079 712 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 SPAM1P38567 509 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 MAGEA3P43357 314 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 GPR1P46091 355 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 ARRB1P49407 418 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 VPS41P49754 854 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 ATXN3P54252 364 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PDE1BQ01064 536 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 DR1Q01658 176 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 ACVR1Q04771 509 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 EIF2B5Q13144 721 aaKnown RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 SLC14A1Q13336 389 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PTK2BQ14289 1009 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PPP1R7Q15435 360 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 KCTD19Q17RG1 926 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 WHAMMP3Q1A5X7 153 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 ALG11Q2TAA5 492 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 RNASEH2BQ5TBB1 312 aaKnown RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 ANKRD22Q5VYY1 191 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 ARMC3Q5W041 872 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 KCTD16Q68DU8 428 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 RAET1GQ6H3X3 334 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PPP1R21Q6ZMI0 780 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 DBX2Q6ZNG2 339 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 SYDE1Q6ZW31 735 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 CAND1Q86VP6 1230 aaKnown RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 JAMLQ86YT9 394 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 KLHL7Q8IXQ5 586 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TRAM1L1Q8N609 369 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 NAT8LQ8N9F0 302 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 MCUQ8NE86 351 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 OR4K2Q8NGD2 314 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 BAHD1Q8TBE0 780 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 SAP25Q8TEE9 199 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PEX13Q92968 403 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PDXPQ96GD0 296 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 SCARF2Q96GP6 870 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TBATAQ96M53 351 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 VPS35Q96QK1 796 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 RANBP9Q96S59 729 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 GTPBP2Q9BX10 602 aaKnown RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 LGR4Q9BXB1 951 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 FRMD8Q9BZ67 464 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 FAM83DQ9H4H8 585 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 BPIFA1Q9NP55 256 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 IL26Q9NPH9 171 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 RRAGDQ9NQL2 400 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PHPT1Q9NRX4 125 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TM7SF3Q9NS93 570 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 NLE1Q9NVX2 485 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 SMOXQ9NWM0 555 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PIH1D1Q9NWS0 290 aaKnown RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 DLL3Q9NYJ7 618 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 VPS18Q9P253 973 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 KLF15Q9UIH9 416 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TMPRSS11EQ9UL52 423 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 RIMKLBQ9ULI2 386 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 CNOT6Q9ULM6 557 aaKnown RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 PKP3Q9Y446 797 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 TCAF1Q9Y4C2 921 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 KCTD3Q9Y597 815 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 DGKBQ9Y6T7 804 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 CHD8Q9HCK8 2581 aa5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 KMT2BQ9UMN6 2715 aaPredicted RBP5.63□□□□□ -1.51
RPUSD4-204ENST00000530036 CEP295Q9C0D2 2601 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms