RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 ZNF71Q9NQZ8 489 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-201ENST00000526271 SLC39A1Q9NY26 324 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 PRKAB1Q9Y478 270 aa14.19□□□□□ -0.14
CPSF1-201ENST00000526271 MRPS18BQ9Y676 258 aaKnown RBP14.19□□□□□ -0.14
CPSF1-201ENST00000526271 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.18□□□□□ -0.14
CPSF1-201ENST00000526271 PSMD11O00231 422 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 MAP3K6O95382 1288 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 DLGAP3O95886 979 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 SFTPCP11686 197 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 NR1D1P20393 614 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 TEX26Q8N6G2 289 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 IL22RA1Q8N6P7 574 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 ZSCAN1Q8NBB4 408 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 SLC45A3Q96JT2 553 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 ANP32EQ9BTT0 268 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 NAT10Q9H0A0 1025 aaKnown RBP14.18□□□□□ -0.14
CPSF1-201ENST00000526271 PARVAQ9NVD7 372 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 SIDT1Q9NXL6 827 aaKnown RBP14.18□□□□□ -0.14
CPSF1-201ENST00000526271 KCNK4Q9NYG8 393 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 OGFRQ9NZT2 677 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 TBC1D29Q9UFV1 150 aa14.18□□□□□ -0.14
CPSF1-201ENST00000526271 GOLGA6CA6NDK9 693 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 GOLGA6BA6NDN3 693 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 A8MU76 341 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 FADS2P1A8MWK0 482 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 PDE2AO00408 941 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-201ENST00000526271 DAPK3O43293 454 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 FTLP02792 175 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-201ENST00000526271 CD48P09326 243 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 FURINP09958 794 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 GOLGA6DP0CG33 693 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 RARAP10276 462 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 FERP16591 822 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 ZNF28P17035 718 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 ATP1A2P50993 1020 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 RENBPP51606 427 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 STC1P52823 247 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 MC2RQ01718 297 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 SLC25A11Q02978 314 aaKnown RBP14.17□□□□□ -0.14
CPSF1-201ENST00000526271 ZNF235Q14590 738 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 TMEM164Q5U3C3 297 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 FAM129CQ86XR2 697 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 ARRDC2Q8TBH0 407 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 EID2BQ96D98 161 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 RIOK2Q9BVS4 552 aaKnown RBP14.17□□□□□ -0.14
CPSF1-201ENST00000526271 HAUS4Q9H6D7 363 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 PCDH18Q9HCL0 1135 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 GOLGA6AQ9NYA3 693 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 DTLQ9NZJ0 730 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 TUBD1Q9UJT1 453 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 PLAAQ9Y263 795 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 SHANK1Q9Y566 2161 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 ITPR2Q14571 2701 aa14.17□□□□□ -0.14
CPSF1-201ENST00000526271 RP1L1Q8IWN7 2480 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-201ENST00000526271 PRRC2CQ9Y520 2896 aaKnown RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 A0A0J9YYE9 177 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 ANKRD62A6NC57 917 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 LRRC53A6NM62 1247 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 INPP4BO15327 924 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 PRPSAP2O60256 369 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 TRBC1P01850 177 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 ATP1A1P05023 1023 aaKnown RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 PRKAR1AP10644 381 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 CYP2A6P11509 494 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 CASRP41180 1078 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 GPR1P46091 355 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 ZNF165P49910 485 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 ARSEP51690 589 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 DSC2Q02487 901 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 NIPAL4Q0D2K0 466 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 CDC20Q12834 499 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 MMRN1Q13201 1228 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 UBAP2LQ14157 1087 aaKnown RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 IQCB1Q15051 598 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 SNAP47Q5SQN1 464 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 HIST2H2BCQ6DN03 193 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 ALG1LQ6GMV1 187 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 PSTKQ8IV42 348 aaKnown RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 AP2M1Q96CW1 435 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 ABHD17AQ96GS6 310 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 BTBD6Q96KE9 485 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 PCMTD1Q96MG8 357 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 TBC1D10AQ9BXI6 508 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 DONSONQ9NYP3 566 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 SCHIP1Q9P0W5 487 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 CNOT8Q9UFF9 292 aaKnown RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 TMEM184BQ9Y519 407 aaPredicted RBP14.16□□□□□ -0.14
CPSF1-201ENST00000526271 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
CPSF1-201ENST00000526271 MFSD11O43934 449 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 CLDN7O95471 211 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 CSTF2P33240 577 aaKnown RBP eCLIP14.15□□□□□ -0.14
CPSF1-201ENST00000526271 MMP13P45452 471 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 GFERP55789 205 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 GPLD1P80108 840 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 MYL5Q02045 173 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 NFATC2Q13469 925 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 ZNF648Q5T619 568 aaPredicted RBP14.15□□□□□ -0.14
CPSF1-201ENST00000526271 ARMC12Q5T9G4 340 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 IYDQ6PHW0 289 aa14.15□□□□□ -0.14
CPSF1-201ENST00000526271 NLRP8Q86W28 1048 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms