RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 CFAP61Q8NHU2 1237 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 PPP1R14CQ8TAE6 165 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 TTC8Q8TAM2 541 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 FAM45AQ8TCE6 357 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 DTX3LQ8TDB6 740 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 HCAR2Q8TDS4 363 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 BADQ92934 168 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 HDAC10Q969S8 669 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 MYEOVQ96EZ4 313 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 CDKN2AIPNLQ96HQ2 116 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 UBXN10Q96LJ8 280 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 ASB2Q96Q27 587 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 TTC1Q99614 292 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 TCF25Q9BQ70 676 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 TRIM56Q9BRZ2 755 aaKnown RBP7.53□□□□□ -1.2
CTR9-202ENST00000524523 HTATIP2Q9BUP3 242 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 SSBP4Q9BWG4 385 aaPredicted RBP7.53□□□□□ -1.2
CTR9-202ENST00000524523 C1QTNF1Q9BXJ1 281 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 TDRD1Q9BXT4 1180 aaKnown RBP7.53□□□□□ -1.2
CTR9-202ENST00000524523 CPEB1Q9BZB8 566 aaKnown RBP7.53□□□□□ -1.2
CTR9-202ENST00000524523 LMAN2LQ9H0V9 348 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 MRPL46Q9H2W6 279 aaKnown RBP7.53□□□□□ -1.2
CTR9-202ENST00000524523 ATXN3LQ9H3M9 355 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 LIN7BQ9HAP6 207 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 KCNK13Q9HB14 408 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 SYTL2Q9HCH5 934 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 PIH1D1Q9NWS0 290 aaKnown RBP7.53□□□□□ -1.2
CTR9-202ENST00000524523 TMEM216Q9P0N5 145 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 VTI1BQ9UEU0 232 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 LNPEPQ9UIQ6 1025 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 VPS28Q9UK41 221 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 SLC39A10Q9ULF5 831 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 TMCO1Q9UM00 188 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 HS3ST2Q9Y278 367 aa7.53□□□□□ -1.2
CTR9-202ENST00000524523 MYO18AQ92614 2054 aaKnown RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 CHD5Q8TDI0 1954 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 FAM95CA0A1B0GW59 222 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 G3V2L1 256 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 CBX4O00257 560 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 EIF1AYO14602 144 aaKnown RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 MUSKO15146 869 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SLC22A2O15244 555 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 CD3EAPO15446 510 aaKnown RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 NPHS1O60500 1241 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 TMCC1O94876 653 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 HAUS5O94927 633 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 CD160O95971 181 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 RECKO95980 971 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 PRKCGP05129 697 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 LTA4HP09960 611 aaKnown RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 H2AFB1P0C5Y9 115 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 H2AFB2P0C5Z0 115 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 MYL2P10916 166 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 FGF3P11487 239 aaPredicted RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 NFKBIAP25963 317 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 HMGCLP35914 325 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 AVPR1AP37288 418 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SLC1A2P43004 574 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SLC1A6P48664 564 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SCNN1BP51168 640 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 ZNF140P52738 457 aaPredicted RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 ABCE1P61221 599 aaKnown RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 MAXP61244 160 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 ARF5P84085 180 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 RAD51Q06609 339 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SEPT6Q14141 434 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 IHHQ14623 411 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 PCLAFQ15004 111 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SH2D4BQ5SQS7 431 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 LIPMQ5VYY2 423 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 ZNF470Q6ECI4 717 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 RAPH1Q70E73 1250 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 ASRGL1Q7L266 308 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 VN1R5Q7Z5H4 357 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 KIAA0907Q7Z7F0 614 aaPredicted RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 CHCHD4Q8N4Q1 142 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SLC25A41Q8N5S1 370 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.52□□□□□ -1.21
CTR9-202ENST00000524523 MAB21L3Q8N8X9 362 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 OR52K2Q8NGK3 314 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 RHEBL1Q8TAI7 183 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SLC22A17Q8WUG5 538 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 FAR2Q96K12 515 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 MEGF10Q96KG7 1140 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 CNDP1Q96KN2 507 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 LMLNQ96KR4 655 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 ZNF641Q96N77 438 aaPredicted RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 GPR78Q96P69 363 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 RAB3IPQ96QF0 476 aaPredicted RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 LYSMD1Q96S90 227 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 CYP2S1Q96SQ9 504 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 OMDQ99983 421 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 SLC46A2Q9BY10 475 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 DRC3Q9H069 523 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 ILKAPQ9H0C8 392 aaPredicted RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 MYLK2Q9H1R3 596 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 MMADHCQ9H3L0 296 aaPredicted RBP7.52□□□□□ -1.21
CTR9-202ENST00000524523 ARHGEF3Q9NR81 526 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 TDP1Q9NUW8 608 aa7.52□□□□□ -1.21
CTR9-202ENST00000524523 DNAJC28Q9NX36 388 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms