RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GSTM1P09488 218 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 COX7A2P14406 83 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 ABRQ12979 859 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 TAF5Q15542 800 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 PHYKPLQ8IUZ5 450 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 RERGQ96A58 199 aaPredicted RBP16.16■□□□□ 0.18
USP42-207ENST00000521713 SPACA7Q96KW9 195 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 FBXL18Q96ME1 805 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 OSBPL10Q9BXB5 764 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 PTGES3LE9PB15 166 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 ASLP04424 464 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 CCR3P51677 355 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 SLC25A3Q00325 362 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 CHMP1BQ7LBR1 199 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 AKAP14Q86UN6 197 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 STYXQ8WUJ0 223 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 CENPIQ92674 756 aaPredicted RBP16.16■□□□□ 0.18
USP42-207ENST00000521713 MYOCQ99972 504 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 DGCR6LQ9BY27 220 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 RNF186Q9NXI6 227 aa16.16■□□□□ 0.18
USP42-207ENST00000521713 FAM237BA0A1B0GVD1 139 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 RNF225M0QZC1 329 aaPredicted RBP16.15■□□□□ 0.18
USP42-207ENST00000521713 STX11O75558 287 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 CDK14O94921 469 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 STBD1O95210 358 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 SPAM1P38567 509 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 CASP12Q6UXS9 341 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 RAVER1Q8IY67 606 aaKnown RBP16.15■□□□□ 0.18
USP42-207ENST00000521713 WDR36Q8NI36 951 aaKnown RBP16.15■□□□□ 0.18
USP42-207ENST00000521713 HEPHQ9BQS7 1158 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 GBA3Q9H227 469 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 ADPRHL2Q9NX46 363 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 EHD3Q9NZN3 535 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 LIMD1Q9UGP4 676 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 YIPF1Q9Y548 306 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 A0A0U1RQJ8 604 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 MZT2AQ6P582 158 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 CNSTQ6PJW8 725 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 DNAJB7Q7Z6W7 309 aaPredicted RBP16.15■□□□□ 0.18
USP42-207ENST00000521713 ZNF276Q8N554 614 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 OR4K2Q8NGD2 314 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 SPPL2AQ8TCT8 520 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 BTBD9Q96Q07 612 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 TMEM109Q9BVC6 243 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 SEMA6AQ9H2E6 1030 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 GSTK1Q9Y2Q3 226 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 CCDC182A6NF36 153 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 YJEFN3A6XGL0 299 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 PER2O15055 1255 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 POU1F1P28069 291 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 PSMD8P48556 350 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 RGS1Q08116 209 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 ZNF621Q6ZSS3 439 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 PQLC1Q8N2U9 271 aa16.15■□□□□ 0.18
USP42-207ENST00000521713 TCRBV9S1A1TA0A576 114 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 MYL12BO14950 172 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 DDX3YO15523 660 aaKnown RBP16.14■□□□□ 0.18
USP42-207ENST00000521713 NDUFB5O43674 189 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 VNN1O95497 513 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 MYL12AP19105 171 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 TYW3Q6IPR3 259 aaKnown RBP16.14■□□□□ 0.18
USP42-207ENST00000521713 C11orf88Q6PI97 169 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 PACS1Q6VY07 963 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 UTP15Q8TED0 518 aaKnown RBP16.14■□□□□ 0.18
USP42-207ENST00000521713 NAT14Q8WUY8 206 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 KCTD4Q8WVF5 259 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 LINGO1Q96FE5 620 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 MINDY3Q9H8M7 445 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 TMEM216Q9P0N5 145 aa16.14■□□□□ 0.18
USP42-207ENST00000521713 MTF2Q9Y483 593 aaPredicted RBP16.14■□□□□ 0.18
USP42-207ENST00000521713 LRP6O75581 1613 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 ZNF12P17014 697 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 GRSF1Q12849 480 aaKnown RBP eCLIP16.14■□□□□ 0.17
USP42-207ENST00000521713 ZNF544Q6NX49 715 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 OR7D4Q8NG98 312 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 CLP1Q92989 425 aaKnown RBP16.14■□□□□ 0.17
USP42-207ENST00000521713 FERD3LQ96RJ6 166 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 HAPLN3Q96S86 360 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 FAM83DQ9H4H8 585 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 RAPGEFL1Q9UHV5 662 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 DLG5Q8TDM6 1919 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 AVILO75366 819 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 TRMUO75648 421 aaKnown RBP16.14■□□□□ 0.17
USP42-207ENST00000521713 EPN2O95208 641 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 CCNDBP1O95273 360 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 PKMP14618 531 aaKnown RBP16.14■□□□□ 0.17
USP42-207ENST00000521713 DDX6P26196 483 aaKnown RBP eCLIP16.14■□□□□ 0.17
USP42-207ENST00000521713 PSME3P61289 254 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 DENND5AQ6IQ26 1287 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 BHLHB9Q6PI77 547 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 GPRIN3Q6ZVF9 776 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 ANKS1BQ7Z6G8 1248 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 KBTBD2Q8IY47 623 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 ZSCAN18Q8TBC5 510 aaPredicted RBP16.14■□□□□ 0.17
USP42-207ENST00000521713 LRRN4Q8WUT4 740 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 ZNF296Q8WUU4 475 aaPredicted RBP16.14■□□□□ 0.17
USP42-207ENST00000521713 CCDC167Q9P0B6 97 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 SLC28A1O00337 649 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 AP2A1O95782 977 aa16.14■□□□□ 0.17
USP42-207ENST00000521713 LYNP07948 512 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms