RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 EIF2S3LQ2VIR3 472 aaKnown RBP3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZSCAN23Q3MJ62 389 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF805Q5CZA5 627 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 COLEC12Q5KU26 742 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLC18B1Q6NT16 456 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 TRAT1Q6PIZ9 186 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 Q6ZSV7 163 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 PTF1AQ7RTS3 328 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 GALNTL5Q7Z4T8 443 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 PATL1Q86TB9 770 aaKnown RBP3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 CHERPQ8IWX8 916 aaKnown RBP3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 TEX11Q8IYF3 940 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 ADAMTS14Q8WXS8 1223 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 VPS33AQ96AX1 596 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 GRAMD2BQ96HH9 432 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 FER1L6-AS2Q96M78 137 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF830Q96NB3 372 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 DESI2Q9BSY9 194 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLC28A3Q9HAS3 691 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 SEBOXQ9HB31 216 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 EPB41L5Q9HCM4 733 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZBTB40Q9NUA8 1239 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 ACSS1Q9NUB1 689 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 PSD3Q9NYI0 1048 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 TAB2Q9NYJ8 693 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 CISD1Q9NZ45 108 aaKnown RBP3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 TINAGQ9UJW2 476 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 OSGIN1Q9UJX0 560 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 FBXW11Q9UKB1 542 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 R3HDM2Q9Y2K5 976 aaKnown RBP3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 SQORQ9Y6N5 450 aa3.47□□□□□ -1.85
HMGN1P28-201ENST00000521340 SOS1Q07889 1333 aaPredicted RBP3.46□□□□□ -1.85
HMGN1P28-201ENST00000521340 CPED1A4D0V7 1026 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 MAGEB17A8MXT2 336 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 HIST1H2ABP04908 130 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 CELA2AP08217 269 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 HIST1H2ADP20671 130 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 GPTP24298 496 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 EEF1DP29692 281 aaKnown RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 HNRNPH1P31943 449 aaKnown RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 LIG4P49917 911 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 P2RX3P56373 397 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 BRWD1-AS2P59051 145 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 HNRNPKP61978 463 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 ST3GAL1Q11201 340 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 GRIK2Q13002 908 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 CTTNQ14247 550 aaKnown RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 HNF4GQ14541 408 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 DECR1Q16698 335 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 RAB6CQ53S08 254 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 IGSF11Q5DX21 431 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 MIS18BP1Q6P0N0 1132 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 TEX38Q6PEX7 206 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 PAPD4Q6PIY7 484 aaKnown RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 B3GNT6Q6ZMB0 384 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 FAM47EQ6ZV65 393 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 HIST3H2AQ7L7L0 130 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 IRF2BP2Q7Z5L9 587 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 SDCCAG8Q86SQ7 713 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 LDB1Q86U70 411 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 CEP57Q86XR8 500 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 AADATQ8N5Z0 425 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 TC2NQ8N9U0 490 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 SCCPDHQ8NBX0 429 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 GOT1L1Q8NHS2 421 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 SLC35F5Q8WV83 523 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 VOPP1Q96AW1 172 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 CFAP57Q96MR6 1250 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 CDRT15Q96T59 188 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 NAA11Q9BSU3 229 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 FAM129AQ9BZQ8 928 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 SPATC1LQ9H0A9 340 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 RAB6CQ9H0N0 254 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 PPP1R3EQ9H7J1 279 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 SIRT3Q9NTG7 399 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 HEY2Q9UBP5 337 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 UBA2Q9UBT2 640 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 TSPYL4Q9UJ04 414 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 TUBE1Q9UJT0 475 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 ERVK-11Q9UQG0 969 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF148Q9UQR1 794 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 BTBD3Q9Y2F9 522 aa3.46□□□□□ -1.86
HMGN1P28-201ENST00000521340 LY6G6EA0A0G2JKS1 128 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 TRBC2A0A5B9 178 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 CLEC18AA5D8T8 446 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 LRRC72A6NJI9 287 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 M0QZ24 198 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PLPP2O43688 288 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 TADA2AO75478 443 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 SLCO2B1O94956 709 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 ABCB1P08183 1280 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 TFPIP10646 304 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 G6PDP11413 515 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 MUTP22033 750 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 UGT1A1P22309 533 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 UBA1P22314 1058 aaKnown RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PTAFRP25105 342 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 MC5RP33032 325 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 ARHGAP25P42331 645 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 MSH2P43246 934 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms