RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 NDNQ99608 321 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 TTC1Q99614 292 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 TRMOQ9BU70 441 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 OSBPL1AQ9BXW6 950 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 PBX4Q9BYU1 374 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 DERL2Q9GZP9 239 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 ILKAPQ9H0C8 392 aaPredicted RBP8.34□□□□□ -1.07
RNF4-220ENST00000513578 CDH19Q9H159 772 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 CCDC68Q9H2F9 335 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
RNF4-220ENST00000513578 DUS2Q9NX74 493 aaKnown RBP8.34□□□□□ -1.07
RNF4-220ENST00000513578 TAS2R13Q9NYV9 303 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 NFKBIL1Q9UBC1 381 aaPredicted RBP8.34□□□□□ -1.07
RNF4-220ENST00000513578 VTI1BQ9UEU0 232 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 LNPEPQ9UIQ6 1025 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 MSRAQ9UJ68 235 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 ZFP69BQ9UJL9 534 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 DCTN4Q9UJW0 460 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 SLC8A2Q9UPR5 921 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 DNAJC16Q9Y2G8 782 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 CRYL1Q9Y2S2 319 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 MED16Q9Y2X0 877 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 WNT6Q9Y6F9 365 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 SLC30A1Q9Y6M5 507 aa8.34□□□□□ -1.07
RNF4-220ENST00000513578 COL4A3Q01955 1670 aa8.34□□□□□ -1.08
RNF4-220ENST00000513578 H3BMM5 538 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 GAPDHSO14556 408 aaPredicted RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 VPS26AO75436 327 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 LYPLA1O75608 230 aaPredicted RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 SRP72O76094 671 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 IPO13O94829 963 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 HSPA4LO95757 839 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 SERPINA6P08185 405 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 ALPIP09923 528 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 T-ENOLP0DO92 83 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 ADH5P11766 374 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 ZNF30P17039 623 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 IMPDH1P20839 514 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 FSHRP23945 695 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 SPAM1P38567 509 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 NRIP1P48552 1158 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 DGKGP49619 791 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 STK19P49842 368 aaPredicted RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 AQP5P55064 265 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 TUBB3Q13509 450 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 EIF4HQ15056 248 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 CRY1Q16526 586 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 FAM78AQ5JUQ0 283 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 TMEM215Q68D42 235 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 UGT3A1Q6NUS8 523 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 BRAT1Q6PJG6 821 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 CRTC1Q6UUV9 634 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 EPGNQ6UW88 154 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 GDPD4Q6W3E5 623 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 ATG14Q6ZNE5 492 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 DPY19L3Q6ZPD9 716 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 USP45Q70EL2 814 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 RBM23Q86U06 439 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 MTDHQ86UE4 582 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 ZSWIM9Q86XI8 627 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 PIANPQ8IYJ0 282 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 OR2A12Q8NGT7 310 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 ANKRD49Q8WVL7 239 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 KIAA1191Q96A73 305 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 MRPL38Q96DV4 380 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 RSPRY1Q96DX4 576 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 THOC1Q96FV9 657 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 RPL10LQ96L21 214 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 LRRC3BQ96PB8 259 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 PLEKHG4BQ96PX9 1271 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 ASB2Q96Q27 587 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 SMIM14Q96QK8 99 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 GDF15Q99988 308 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 FAM83CQ9BQN1 747 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 HEPHQ9BQS7 1158 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 TNKS2Q9H2K2 1166 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 ECT2Q9H8V3 914 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 ARHGEF3Q9NR81 526 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 LATS2Q9NRM7 1088 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 RAD18Q9NS91 495 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 NCKIPSDQ9NZQ3 722 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 CPSF2Q9P2I0 782 aaKnown RBP8.33□□□□□ -1.08
RNF4-220ENST00000513578 KLHL42Q9P2K6 505 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 DKK3Q9UBP4 350 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 SLCO3A1Q9UIG8 710 aa8.33□□□□□ -1.08
RNF4-220ENST00000513578 GLYATL1P3A0A0U1RQE8 302 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 C1orf232A0A0U1RR37 186 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 RGSL1A5PLK6 1076 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 A8MT66 165 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 CAPN14A8MX76 684 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 ANKRD65E5RJM6 399 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 MATN2O00339 956 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 FCHO1O14526 889 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 PRMT5O14744 637 aaPredicted RBP8.32□□□□□ -1.08
RNF4-220ENST00000513578 KLK8O60259 260 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 RHOBTB1O94844 696 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 TPBGLP0DKB5 382 aa8.32□□□□□ -1.08
RNF4-220ENST00000513578 CYP2A6P11509 494 aaPredicted RBP8.32□□□□□ -1.08
RNF4-220ENST00000513578 ZNF7P17097 686 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms