RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 OR51F1A6NGY5 319 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 E7ESA3 106 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 CYP11A1P05108 521 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 ABCB1P08183 1280 aaPredicted RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 IDO1P14902 403 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 RFC2P35250 354 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 RPL38P63173 70 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 OCA2Q04671 838 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SERPINA9Q86WD7 417 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 ULK2Q8IYT8 1036 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 RNF145Q96MT1 663 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SPAG4Q9NPE6 437 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 PDP2Q9P2J9 529 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 ANKDD1BA6NHY2 528 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 DCLK1O15075 740 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 WDR47O94967 919 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 LDLRP01130 860 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 AHSGP02765 367 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 PRNPP04156 253 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 RING1Q06587 406 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 LRRC23Q53EV4 343 aaPredicted RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SIRPB2Q5JXA9 342 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 TMC5Q6UXY8 1006 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 LRRTM3Q86VH5 581 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF786Q8N393 782 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 TMEM132CQ8N3T6 1108 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 STARD8Q92502 1023 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 AP2M1Q96CW1 435 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 C1orf50Q9BV19 199 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SAC3D1A6NKF1 404 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 FGF18O76093 207 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 IFNA14P01570 189 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 AFF1P51825 1210 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 IYDQ6PHW0 289 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 ZC3HC1Q86WB0 502 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 CPNE9Q8IYJ1 553 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 RBM15BQ8NDT2 890 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 BHLHE22Q8NFJ8 381 aaPredicted RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SGIP1Q9BQI5 828 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 TBCDQ9BTW9 1192 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SYNDIG1Q9H7V2 258 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 INTS10Q9NVR2 710 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 INVSQ9Y283 1065 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF839A8K0R7 811 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 ABLIM1O14639 778 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 ITGB1P05556 798 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 CCT8P50990 548 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 RAD23AP54725 363 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 CAP1Q01518 475 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 SLC18A2Q05940 514 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 TRAF2Q12933 501 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 OTUD3Q5T2D3 398 aaPredicted RBP13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 ARHGAP36Q6ZRI8 547 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 EFCAB3Q8N7B9 438 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 OSCP1Q8WVF1 389 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 UBE2E3Q969T4 207 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 CCDC28BQ9BUN5 200 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 VPS51Q9UID3 782 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 PRPF19Q9UMS4 504 aaKnown RBP13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 ASF1AQ9Y294 204 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 M0QZQ0 153 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 STK16O75716 305 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 KRT36O76013 467 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 DGKGP49619 791 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 TSNQ15631 228 aaKnown RBP13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 FBXO48Q5FWF7 155 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 KLHL32Q96NJ5 620 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 TMLHEQ9NVH6 421 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 SCN3BQ9NY72 215 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 TIMM22Q9Y584 194 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 SLC28A1O00337 649 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 NRP2O60462 931 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 EPHX1P07099 455 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 CSF2RAP15509 400 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 VEGFBP49765 207 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 ELP6Q0PNE2 266 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 LCP2Q13094 533 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 XKR6Q5GH73 641 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 RTP2Q5QGT7 225 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 FAM43BQ6ZT52 329 aaPredicted RBP13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 COLGALT2Q8IYK4 626 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 UBR7Q8N806 425 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 FAM13CQ8NE31 585 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 CLP1Q92989 425 aaKnown RBP13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 C19orf60Q96EN9 201 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 MFSD1Q9H3U5 465 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 FBXO10Q9UK96 956 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
PCDHA4-202ENST00000512229 PFKMP08237 780 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 PABPC1P11940 636 aaKnown RBP13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 COX7A2P14406 83 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 CLCQ05315 142 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 KIAA1324Q6UXG2 1013 aaKnown RBP13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 RAVER1Q8IY67 606 aaKnown RBP13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 UMODL1-AS1Q8N2C9 162 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 DCBLD1Q8N8Z6 715 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF184Q99676 751 aaPredicted RBP13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 DNAJC28Q9NX36 388 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 SLC2A6Q9UGQ3 507 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms