RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 AGAP3Q96P47 875 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 TGM7Q96PF1 710 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 FCRL4Q96PJ5 515 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 WDR77Q9BQA1 342 aaPredicted RBP10.68□□□□□ -0.7
SNF8-207ENST00000509995 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.68□□□□□ -0.7
SNF8-207ENST00000509995 SUV39H2Q9H5I1 410 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 ZNF552Q9H707 407 aaPredicted RBP10.68□□□□□ -0.7
SNF8-207ENST00000509995 PDE7BQ9NP56 450 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 NDFIP2Q9NV92 336 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 OGFRQ9NZT2 677 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 RARRES3Q9UL19 164 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 TCFL5Q9UL49 500 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 CSAG2Q9Y5P2 127 aa10.68□□□□□ -0.7
SNF8-207ENST00000509995 AKAP6Q13023 2319 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 POLR2DO15514 142 aaKnown RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 CPNE3O75131 537 aaKnown RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 DAB1O75553 588 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 JRKO75564 520 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 FOSL1P15407 271 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 TFE3P19532 575 aaPredicted RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 CA5AP35218 305 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 KIR3DL1P43629 444 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 TSFMP43897 325 aaKnown RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 OTUD4Q01804 1114 aaKnown RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 FOXD4Q12950 439 aaPredicted RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 TUBB3Q13509 450 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 GRM3Q14832 879 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 AFMIDQ63HM1 303 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 XKRXQ6PP77 449 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 PRSS42Q7Z5A4 293 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 SLC9B2Q86UD5 537 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 GRAMD1CQ8IYS0 662 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 ENDOVQ8N8Q3 282 aaKnown RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 CASKIN2Q8WXE0 1202 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 MR1Q95460 341 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 NUS1Q96E22 293 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 SCARF2Q96GP6 870 aaPredicted RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 USP28Q96RU2 1077 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 FOXC2Q99958 501 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 SPOCK3Q9BQ16 436 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 ZBTB20Q9HC78 741 aaPredicted RBP10.67□□□□□ -0.7
SNF8-207ENST00000509995 SEMA3GQ9NS98 782 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 SMC3Q9UQE7 1217 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 SEC16AO15027 2179 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 DOCK10Q96BY6 2186 aa10.67□□□□□ -0.7
SNF8-207ENST00000509995 CCL21O00585 134 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 FANCGO15287 622 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 BUB1O43683 1085 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 KLHL41O60662 606 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 KCNK10P57789 538 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 Q0VFX4 171 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 GPS2Q13227 327 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 LRP8Q14114 963 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 ACOX1Q15067 660 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 ASIC2Q16515 512 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 DCAF17Q5H9S7 520 aaPredicted RBP10.66□□□□□ -0.7
SNF8-207ENST00000509995 TMCO4Q5TGY1 634 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 TCERG1LQ5VWI1 586 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 IYDQ6PHW0 289 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 DOK6Q6PKX4 331 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 OLFML1Q6UWY5 402 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 DPPA4Q7L190 304 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 DNAAF5Q86Y56 855 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 GALNT16Q8N428 558 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 KLHL6Q8WZ60 621 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 KAT5Q92993 513 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 INTS4Q96HW7 963 aaKnown RBP10.66□□□□□ -0.7
SNF8-207ENST00000509995 ZNF641Q96N77 438 aaPredicted RBP10.66□□□□□ -0.7
SNF8-207ENST00000509995 CPXM1Q96SM3 734 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 NPY6RQ99463 290 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 MAGEH1Q9H213 219 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 CHST8Q9H2A9 424 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 WASH6PQ9NQA3 447 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 OLAHQ9NV23 265 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 PPARGC1AQ9UBK2 798 aaKnown RBP10.66□□□□□ -0.7
SNF8-207ENST00000509995 LHX3Q9UBR4 397 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 CNOT8Q9UFF9 292 aaKnown RBP10.66□□□□□ -0.7
SNF8-207ENST00000509995 DNAI1Q9UI46 699 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 SPTBP11277 2137 aa10.66□□□□□ -0.7
SNF8-207ENST00000509995 TRGV8A0A0C4DH27 118 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 A0A0U1RQS6 177 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 KDELR3O43731 214 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 KIF1CO43896 1103 aaKnown RBP10.65□□□□□ -0.7
SNF8-207ENST00000509995 RAMP2O60895 175 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 RAB40ALP0C0E4 278 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 EPB41P11171 864 aaKnown RBP10.65□□□□□ -0.7
SNF8-207ENST00000509995 TYRP1P17643 537 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 NELFEP18615 380 aaKnown RBP10.65□□□□□ -0.7
SNF8-207ENST00000509995 DNAJA1P31689 397 aaKnown RBP10.65□□□□□ -0.7
SNF8-207ENST00000509995 PBX1P40424 430 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 MAPKAPK2P49137 400 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 IST1P53990 364 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 CDC16Q13042 620 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 PYCR3Q53H96 274 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 INO80DQ53TQ3 878 aaPredicted RBP10.65□□□□□ -0.7
SNF8-207ENST00000509995 FCRL6Q6DN72 434 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 SHC4Q6S5L8 630 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 FAM180AQ6UWF9 173 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 FAM183BPQ6ZVS7 135 aa10.65□□□□□ -0.7
SNF8-207ENST00000509995 Q71RC1 249 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms