RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 ACSS1Q9NUB1 689 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-225ENST00000508476 DLGAP4Q9Y2H0 992 aa4.44□□□□□ -1.7
UBE2D3-225ENST00000508476 LRRC53A6NM62 1247 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 DVL1O14640 695 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 WDR1O75083 606 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 APOHP02749 345 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 PIP4K2AP48426 406 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 DVL1P1P54792 670 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 FOXM1Q08050 763 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 ZNF234Q14588 700 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 SIRPB2Q5JXA9 342 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 C6orf141Q5SZD1 244 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 SIGIRRQ6IA17 410 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 ZNF354CQ86Y25 554 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 NRROSQ86YC3 692 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 CNTROBQ8N137 903 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 SRBD1Q8N5C6 995 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 METTL27Q8N6F8 245 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 GTF3C6Q969F1 213 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 IGSF8Q969P0 613 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 TMEM47Q9BQJ4 181 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 LRRC1Q9BTT6 524 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 SLC28A3Q9HAS3 691 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 ARHGAP26Q9UNA1 814 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 TAF1P21675 1872 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 PTPRCP08575 1304 aa4.43□□□□□ -1.7
UBE2D3-225ENST00000508476 GREB1LQ9C091 1923 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 FAM72CH0Y354 149 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 SPINT2O43291 252 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 CDKN1AP38936 164 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 HARS2P49590 506 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 RUNX1T1Q06455 604 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 GSTA3Q16772 222 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 CXorf66Q5JRM2 361 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 FAM72AQ5TYM5 149 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 FRG2Q64ET8 278 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 FAM72DQ6L9T8 149 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 FAM171BQ6P995 826 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 DPPA4Q7L190 304 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 FAM72BQ86X60 149 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 CPXCR1Q8N123 301 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 OR14L1PQ8NHC6 308 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 NFKBIDQ8NI38 313 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 SLC44A1Q8WWI5 657 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 PSPC1Q8WXF1 523 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 APBB2Q92870 758 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 QRFPRQ96P65 431 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 NR1H4Q96RI1 486 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 ACOX2Q99424 681 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 PCGF1Q9BSM1 259 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 PAIP1Q9H074 479 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 HCFC1R1Q9NWW0 138 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 DDX43Q9NXZ2 648 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 TCF19Q9Y242 345 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 KLHL20Q9Y2M5 609 aa4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 LRRFIP2Q9Y608 721 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-225ENST00000508476 FAM237AA0A1B0GTK4 181 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 CTAGE9A4FU28 777 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 ZNHIT1O43257 154 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 CTAGE8P0CG41 777 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 EPHA8P29322 1005 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 ICAM3P32942 547 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 ATP12AP54707 1039 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 CLDN20P56880 219 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 SREBF2Q12772 1141 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 FOXD4Q12950 439 aaPredicted RBP4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 PDSS1Q5T2R2 415 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 OR7E24Q6IFN5 339 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 CTAGE4Q8IX94 777 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 KLHDC9Q8NEP7 349 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 OR52I2Q8NH67 350 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 RRP36Q96EU6 259 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 EIF2AK1Q9BQI3 630 aaKnown RBP4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 AGXT2Q9BYV1 514 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 ASAH2Q9NR71 780 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 ABI3Q9P2A4 366 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 HAO1Q9UJM8 370 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 ACSL5Q9ULC5 683 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 KDM3AQ9Y4C1 1321 aa4.41□□□□□ -1.7
UBE2D3-225ENST00000508476 TTC36A6NLP5 189 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 TGFB1I1O43294 461 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 NKX2-2O95096 273 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 APOBEC1P41238 236 aaKnown RBP4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 COG7P83436 770 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 TBX2Q13207 712 aaPredicted RBP4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 DECR1Q16698 335 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 C14orf177Q52M58 125 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 TTI2Q6NXR4 508 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 TSSK4Q6SA08 328 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 TAAR8Q969N4 342 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 SAAL1Q96ER3 474 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 LINGO1Q96FE5 620 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 NEUROD6Q96NK8 337 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 DUX3Q96PT4 197 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 PIP5K1AQ99755 562 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 WASH6PQ9NQA3 447 aa4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.4□□□□□ -1.71
UBE2D3-225ENST00000508476 CCDC196A0A1B0GTZ2 297 aa4.39□□□□□ -1.71
UBE2D3-225ENST00000508476 C1orf226A1L170 272 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms