RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 UBL4BQ8N7F7 174 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 ARL10Q8N8L6 244 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 TSEN2Q8NCE0 465 aaKnown RBP9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 KIAA1524Q8TCG1 905 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 JPH3Q8WXH2 748 aaPredicted RBP9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 RAPGEF5Q92565 580 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 USP7Q93009 1102 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 NKD1Q969G9 470 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 ECHDC3Q96DC8 303 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 KLHL32Q96NJ5 620 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 LENG8Q96PV6 779 aaPredicted RBP9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 GFM1Q96RP9 751 aaKnown RBP9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 FERMT1Q9BQL6 677 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 C1QTNF2Q9BXJ5 285 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 LRRC4CQ9HCJ2 640 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 DNPEPQ9ULA0 475 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 SRPK3Q9UPE1 567 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 ACTL7AQ9Y615 435 aa9.22□□□□□ -0.93
UBE2D3-223ENST00000508249 TNRC6AQ8NDV7 1962 aaKnown RBP9.21□□□□□ -0.93
UBE2D3-223ENST00000508249 C3orf70A6NLC5 250 aaPredicted RBP9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 K7EM74 188 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 AGRPO00253 132 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 INSIG1O15503 277 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 PEX11BO96011 259 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 JMJD7P0C870 316 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 LIFP15018 202 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 SCNN1BP51168 640 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 RWDD2BP57060 319 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 PPIDQ08752 370 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 SLC10A7Q0GE19 358 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 SGCGQ13326 291 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 SLC14A2Q15849 920 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 UGP2Q16851 508 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 TMEM52BQ4KMG9 183 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 ZNF787Q6DD87 383 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 LEKR1Q6ZMV7 388 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 ZNF662Q6ZS27 426 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 TTC7BQ86TV6 843 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 RAVER1Q8IY67 606 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 PAF1Q8N7H5 531 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 PLD5Q8N7P1 536 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 ACRBPQ8NEB7 543 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 OR6K2Q8NGY2 324 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 CXorf40AQ8TE69 158 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 CENPTQ96BT3 561 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 LRRN3Q9H3W5 708 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 GRPEL1Q9HAV7 217 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 ZNF71Q9NQZ8 489 aaPredicted RBP9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 DTLQ9NZJ0 730 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 SPASTQ9UBP0 616 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 AMFRQ9UKV5 643 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 ITM2BQ9Y287 266 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 ATP8A1Q9Y2Q0 1164 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 REXO2Q9Y3B8 237 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 PCDHA3Q9Y5H8 950 aa9.21□□□□□ -0.94
UBE2D3-223ENST00000508249 POLQO75417 2590 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 hCG_1818297A0A087WSY0 165 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 HACD1B0YJ81 288 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 HTRA2O43464 458 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 DUX1O43812 170 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CCDC175P0C221 793 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CYP2A6P11509 494 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CCL4P13236 92 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CCNB1P14635 433 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 NR1D1P20393 614 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CD82P27701 267 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CDKN2BP42772 138 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 RPIAP49247 311 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 RPL26P61254 145 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 IFI35P80217 286 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 GBE1Q04446 702 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 AGERQ15109 404 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CAPRIN2Q6IMN6 1127 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 MFSD7Q6UXD7 560 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 SPOCD1Q6ZMY3 1216 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 ARHGAP36Q6ZRI8 547 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 BBS12Q6ZW61 710 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 PEX26Q7Z412 305 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CPNE8Q86YQ8 564 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CCDC50Q8IVM0 306 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 LRRC8AQ8IWT6 810 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 ZSCAN1Q8NBB4 408 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 CCNYQ8ND76 341 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 C9orf43Q8TAL5 461 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 P3H4Q92791 437 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 FUBP1Q96AE4 644 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 EXOC2Q96KP1 924 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 TMEM74Q96NL1 305 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 OLFM3Q96PB7 478 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 VAT1Q99536 393 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 STRADBQ9C0K7 418 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 LACRTQ9GZZ8 138 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 SEMA6CQ9H3T2 930 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 SEPT10Q9P0V9 454 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 SIRPGQ9P1W8 387 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 PHTF1Q9UMS5 762 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 RPL26L1Q9UNX3 145 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 ADGRG1Q9Y653 693 aa9.2□□□□□ -0.94
UBE2D3-223ENST00000508249 F8P00451 2351 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms