RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 SIKE1Q9BRV8 207 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 ZBTB26Q9HCK0 441 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 ATP13A1Q9HD20 1204 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 OLA1Q9NTK5 396 aaKnown RBP9.57□□□□□ -0.88
PHF3-208ENST00000506783 INTS7Q9NVH2 962 aaKnown RBP9.57□□□□□ -0.88
PHF3-208ENST00000506783 MYRFQ9Y2G1 1151 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 FAM186AA6NE01 2351 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 BOLA2-SMG1P6H3BVE0 249 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 TRIM38O00635 465 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 GLUD2P49448 558 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 RENBPP51606 427 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 NEK2P51955 445 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 DYNC1I2Q13409 638 aaKnown RBP9.57□□□□□ -0.88
PHF3-208ENST00000506783 DPYSQ14117 519 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 SPIDRQ14159 915 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 TAZQ16635 292 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 CYP27C1Q4G0S4 372 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 KBTBD6Q86V97 674 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 SPPL2BQ8TCT7 592 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 PTERQ96BW5 349 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 DGCR14Q96DF8 476 aaKnown RBP9.57□□□□□ -0.88
PHF3-208ENST00000506783 TSSK3Q96PN8 268 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 ITM2CQ9NQX7 267 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 CREBZFQ9NS37 354 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 CACNA2D2Q9NY47 1150 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 IGSF9Q9P2J2 1179 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 CD84Q9UIB8 345 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 FKBPLQ9UIM3 349 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 H3BNX3 289 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 HS6ST1O60243 411 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 TRMUO75648 421 aaKnown RBP9.57□□□□□ -0.88
PHF3-208ENST00000506783 SNAP29O95721 258 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 IL7RP16871 459 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 PBLDP30039 288 aaPredicted RBP9.57□□□□□ -0.88
PHF3-208ENST00000506783 HSPA7P48741 367 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 NDST2P52849 883 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 RPL38P63173 70 aaKnown RBP9.57□□□□□ -0.88
PHF3-208ENST00000506783 SIRPB2Q5JXA9 342 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 FBXL22Q6P050 247 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 OR52B6Q8NGF0 335 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 TMEM106CQ9BVX2 250 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 CINPQ9BW66 212 aaPredicted RBP9.57□□□□□ -0.88
PHF3-208ENST00000506783 SMURF2Q9HAU4 748 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 CASS4Q9NQ75 786 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 OSER1Q9NX31 292 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 FETUBQ9UGM5 382 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 TRHDEQ9UKU6 1024 aa9.57□□□□□ -0.88
PHF3-208ENST00000506783 CCDC154A6NI56 674 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 AZIN1O14977 448 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 MGEA5O60502 916 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 CPSF4O95639 269 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 ALBP02768 609 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 FASP25445 335 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 HARS2P49590 506 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 KPNA2P52292 529 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 DAB2P98082 770 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 BOP1Q14137 746 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 ZNF423Q2M1K9 1284 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 CHSY3Q70JA7 882 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 PIWIL4Q7Z3Z4 852 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 PGAM4Q8N0Y7 254 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 RNF175Q8N4F7 328 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 TEX37Q96LM6 180 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 GPR22Q99680 433 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 TNKS2Q9H2K2 1166 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 TRMT6Q9UJA5 497 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 CNOT6Q9ULM6 557 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 SEC16AO15027 2179 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 DPYSL4O14531 572 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 UBFD1O14562 309 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 SCAMP1O15126 338 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 FKTNO75072 461 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 MLNP12872 115 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 ZNF182P17025 639 aaPredicted RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 ZNF37AP17032 561 aaPredicted RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 PTGR1Q14914 329 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 ZNF792Q3KQV3 632 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 UBXN11Q5T124 520 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 GRAMD4Q6IC98 578 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 FAM162AQ96A26 154 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 LINGO1Q96FE5 620 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 ASIC4Q96FT7 647 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 PLEKHG4BQ96PX9 1271 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 VPS28Q9UK41 221 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 FCF1Q9Y324 198 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 POLR3HQ9Y535 204 aaPredicted RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 SLC30A1Q9Y6M5 507 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 RREB1Q92766 1687 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 RSL1D1O76021 490 aaKnown RBP9.56□□□□□ -0.88
PHF3-208ENST00000506783 B3GALT4O96024 378 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 SERPINF2P08697 491 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 SBK3P0C264 359 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 MASP1P48740 699 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 KYAT1Q16773 422 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 MRNIPQ6NTE8 343 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 RETREG3Q86VR2 466 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 ZNF366Q8N895 744 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 TRIB2Q92519 343 aa9.56□□□□□ -0.88
PHF3-208ENST00000506783 MYEOVQ96EZ4 313 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms