RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 PPP1R16AQ96I34 528 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 TBATAQ96M53 351 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 MCCC1Q96RQ3 725 aaPredicted RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 SUDS3Q9H7L9 328 aaPredicted RBP9.34□□□□□ -0.91
TPM3-218ENST00000505010 ZFYVE1Q9HBF4 777 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 BPIFA1Q9NP55 256 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 PRSS16Q9NQE7 514 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 DYRK4Q9NR20 520 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 CATSPERZQ9NTU4 200 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 DKK3Q9UBP4 350 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 B4GALT6Q9UBX8 382 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 FKBPLQ9UIM3 349 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 ZNF180Q9UJW8 692 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 STARD13Q9Y3M8 1113 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 PKP3Q9Y446 797 aa9.34□□□□□ -0.91
TPM3-218ENST00000505010 F5P12259 2224 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 SHISA7A6NL88 538 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 C16orf96A6NNT2 1141 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CHURC1-FNTBB4DL54 471 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CD3EAPO15446 510 aaKnown RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 SYNCRIPO60506 623 aaKnown RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 KCNK5O95279 499 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CLDN7O95471 211 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 KLF8O95600 359 aaPredicted RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 GOT2P00505 430 aaKnown RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 CNTFP26441 200 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 VIPR1P32241 457 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 MC4RP32245 332 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 KIR2DL1P43626 348 aaPredicted RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 FNTBP49356 437 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 METAP1P53582 386 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CSE1LP55060 971 aaKnown RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 SRSF5Q13243 272 aaKnown RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 CTBP1Q13363 440 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 ARHGEF7Q14155 803 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 STARD3Q14849 445 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 UGP2Q16851 508 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 TNFAIP8L3Q5GJ75 292 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 GRTP1Q5TC63 336 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 SDE2Q6IQ49 451 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CRTC1Q6UUV9 634 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CEP68Q76N32 757 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 TRABD2AQ86V40 505 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 LONP2Q86WA8 852 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 MMAAQ8IVH4 418 aaKnown RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 DENND6AQ8IWF6 608 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CNTN4Q8IWV2 1026 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 TMIEQ8NEW7 156 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CALML6Q8TD86 181 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 FAM3CQ92520 227 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 ARRDC3Q96B67 414 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 SCRN2Q96FV2 425 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 CDKN2AIPNLQ96HQ2 116 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 LYSMD1Q96S90 227 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 RBBP8Q99708 897 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 PCDH12Q9NPG4 1184 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 FBXO6Q9NRD1 293 aaPredicted RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 MARCH4Q9P2E8 410 aaPredicted RBP9.33□□□□□ -0.92
TPM3-218ENST00000505010 SARDHQ9UL12 918 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 PPM1HQ9ULR3 514 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 BPTFQ12830 3046 aa9.33□□□□□ -0.92
TPM3-218ENST00000505010 A0A1W2PPM1 405 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 PLK4O00444 970 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 RNASEH1O60930 286 aaKnown RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 MT-ND3P03897 115 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 ITGA2BP08514 1039 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 SNRPAP09012 282 aaKnown RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 C1SP09871 688 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 ZNF806P0C7X5 589 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 HOXB2P14652 356 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 TIMP2P16035 220 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 LHCGRP22888 699 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 NTSR1P30989 418 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 SPRP35270 261 aaPredicted RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 HMGCLP35914 325 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 HADHAP40939 763 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 CD151P48509 253 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 SERPINB8P50452 374 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 LIMK2P53671 638 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 PPP2R2AP63151 447 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 SATB1Q01826 763 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 PPARDQ03181 441 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 CAMK2GQ13555 558 aaPredicted RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 ENPP2Q13822 863 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 SF3A2Q15428 464 aaKnown RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 CDKN3Q16667 212 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 FASTKD1Q53R41 847 aaKnown RBP9.32□□□□□ -0.92
TPM3-218ENST00000505010 ZRANB3Q5FWF4 1079 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 MROH9Q5TGP6 573 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 STPG1Q5TH74 334 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 FAM46CQ5VWP2 391 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 MRNIPQ6NTE8 343 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 FAM151BQ6UXP7 276 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 KIAA0408Q6ZU52 694 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 DPPA4Q7L190 304 aa9.32□□□□□ -0.92
TPM3-218ENST00000505010 TRMT11Q7Z4G4 463 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms