RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 THOC5Q13769 683 aaKnown RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 PDE1CQ14123 709 aaPredicted RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 ZNF460Q14592 562 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 CHRNA6Q15825 494 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 CST6Q15828 149 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 DBN1Q16643 649 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 TMEM52BQ4KMG9 183 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 PPM1JQ5JR12 505 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 CTSL3PQ5NE16 218 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 HENMT1Q5T8I9 393 aaKnown RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 FAM151BQ6UXP7 276 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 TMEM92Q6UXU6 159 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 Q6ZS52 159 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 SLC41A1Q8IVJ1 513 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 CEP97Q8IW35 865 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 CHPFQ8IZ52 775 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 PLD6Q8N2A8 252 aaKnown RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 PELI3Q8N2H9 469 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 TXNDC5Q8NBS9 432 aaKnown RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 OR6P1Q8NGX9 317 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 OR2T3Q8NH03 318 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 DTX3LQ8TDB6 740 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 FUBP1Q96AE4 644 aaKnown RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 ATXN7L3BQ96GX2 97 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 APOPT1Q96IL0 206 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 BIRC8Q96P09 236 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 NDNQ99608 321 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 OMDQ99983 421 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 STMN4Q9H169 189 aaPredicted RBP10.35□□□□□ -0.75
TPM3-217ENST00000504663 P2RY12Q9H244 342 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 FAM96AQ9H5X1 160 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 C2orf42Q9NWW7 574 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 FADS3Q9Y5Q0 445 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 DOCK9Q9BZ29 2069 aa10.35□□□□□ -0.75
TPM3-217ENST00000504663 IGLV3-16A0A075B6K0 115 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 FAM95CA0A1B0GW59 222 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 FADS2P1A8MWK0 482 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 OR1I1O60431 355 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 SHOX2O60902 331 aaPredicted RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 SRP72O76094 671 aaKnown RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 PRAMEF1O95521 474 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 ASMTLO95671 621 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 SLC35E2BP0CK96 405 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 CHRNB1P11230 501 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 CYP2A6P11509 494 aaPredicted RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 CHN1P15882 459 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 FDXRP22570 491 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 TARSP26639 723 aaKnown RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 ATP5DP30049 168 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 RPA3P35244 121 aaPredicted RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 SERPINB8P50452 374 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 CLCN5P51795 746 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 PTPN5P54829 565 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 CDKN2DP55273 166 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 POLR2LP62875 67 aaKnown RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 MRPS21P82921 87 aaKnown RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 B4GALNT1Q00973 533 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 IRF9Q00978 393 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 CACNG1Q06432 222 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 DLG1Q12959 904 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 NFATC2Q13469 925 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 GAS6Q14393 721 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 TMEM207Q6UWW9 146 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 ERN2Q76MJ5 926 aaKnown RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 CENPLQ8N0S6 344 aaPredicted RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 LKAAEAR1Q8TD35 194 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 CALML6Q8TD86 181 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 ACMSDQ8TDX5 336 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 FAM3CQ92520 227 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 GPR78Q96P69 363 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 PLEKHG4BQ96PX9 1271 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 AARSD1Q9BTE6 412 aaKnown RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 CD93Q9NPY3 652 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 PCMTD2Q9NV79 361 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 INTS10Q9NVR2 710 aaKnown RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 SMOXQ9NWM0 555 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 SLC17A7Q9P2U7 560 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 MBD1Q9UIS9 605 aaPredicted RBP10.34□□□□□ -0.75
TPM3-217ENST00000504663 NUMA1Q14980 2115 aa10.34□□□□□ -0.75
TPM3-217ENST00000504663 GLYATL1P3A0A0U1RQE8 302 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 FAM47DPA6NHR8 397 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 C1QTNF3-AMACRE9PGA6 284 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 H0Y858 1186 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 PSMD11O00231 422 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 PHGDHO43175 533 aaKnown RBP10.33□□□□□ -0.76
TPM3-217ENST00000504663 AP1G1O43747 822 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 SGTAO43765 313 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 IL1BP01584 269 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 MT-ND3P03897 115 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 C2P06681 752 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 SBK3P0C264 359 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 HOXB2P14652 356 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 UGT1A6P19224 532 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 UGT1A1P22309 533 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 UGT1A4P22310 534 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 ACRV1P26436 265 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 UGT1A3P35503 534 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 UGT1A5P35504 534 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 MDH1P40925 334 aaKnown RBP10.33□□□□□ -0.76
TPM3-217ENST00000504663 ETV3P41162 512 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms