RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ZSWIM9Q86XI8 627 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 FAM136AQ96C01 138 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 ZNF707Q96C28 371 aaPredicted RBP21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 PHF21BQ96EK2 531 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 ATOH8Q96SQ7 321 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 ZFYVE1Q9HBF4 777 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 ZDHHC7Q9NXF8 308 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 ZMYM5Q9UJ78 669 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 HCFC2Q9Y5Z7 792 aa21.25■□□□□ 0.99
UBE2D3-216ENST00000503742 CAPN8A6NHC0 703 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 B2RBV5 119 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 SPECC1L-ADORA2AF8WAN1 911 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 GAPDHSO14556 408 aaPredicted RBP21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 PABPC1P11940 636 aaKnown RBP21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 HNRNPLP14866 589 aaKnown RBP eCLIP21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 SERPINA4P29622 427 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 PTGER3P43115 390 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 MYLK3Q32MK0 819 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 FRMD7Q6ZUT3 714 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 TMPRSS6Q8IU80 811 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 GRIN3AQ8TCU5 1115 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 ECHDC3Q96DC8 303 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 TUBGCP5Q96RT8 1024 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 LYSMD1Q96S90 227 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 GPR21Q99679 349 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 CEP44Q9C0F1 390 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 GSTO2Q9H4Y5 243 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 YY1AP1Q9H869 796 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 GALPQ9UBC7 116 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 FNDC3AQ9Y2H6 1198 aaKnown RBP21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 COMMD10Q9Y6G5 202 aa21.24■□□□□ 0.99
UBE2D3-216ENST00000503742 MTHFD2P13995 350 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 TYRP14679 529 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 KDSRQ06136 332 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 ZNF678Q5SXM1 525 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 STK40Q8N2I9 435 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 RYBPQ8N488 228 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 ZNF557Q8N988 423 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 KIAA1191Q96A73 305 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 NUF2Q9BZD4 464 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 P2RY12Q9H244 342 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 WDR55Q9H6Y2 383 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 HECAQ9UBI9 543 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 SLC25A13Q9UJS0 675 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 SLC30A1Q9Y6M5 507 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 C1orf232A0A0U1RR37 186 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 PER2O15055 1255 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 SMIM24O75264 130 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 WFS1O76024 890 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 JUNP05412 331 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 PYGLP06737 847 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 SULT2A1Q06520 285 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 DMC1Q14565 340 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 SH2D4BQ5SQS7 431 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 ZNF697Q5TEC3 545 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 KIAA0907Q7Z7F0 614 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 ADGRG2Q8IZP9 1017 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 PCDH20Q8N6Y1 951 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 RBM15BQ8NDT2 890 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 FBXO27Q8NI29 283 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 MAGEC3Q8TD91 643 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 SLC30A3Q99726 388 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 TRMOQ9BU70 441 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 CCDC28BQ9BUN5 200 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 OSBPL1AQ9BXW6 950 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 EML4Q9HC35 981 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 MARK1Q9P0L2 795 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 PPIL1Q9Y3C6 166 aa21.23■□□□□ 0.99
UBE2D3-216ENST00000503742 PDE4DIPQ5VU43 2346 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 E9PBE3 544 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 GPR39O43194 453 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 KLHL41O60662 606 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 NIPSNAP2O75323 286 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 VPS26AO75436 327 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 CLDN7O95471 211 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 ESR1P03372 595 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 TPBGLP0DKB5 382 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 CEBPBP17676 345 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 NCF2P19878 526 aaPredicted RBP21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 ATP6V0D1P61421 351 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 RAD51Q06609 339 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 LSM12Q3MHD2 195 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 LY6G5CQ5SRR4 150 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 PDE12Q6L8Q7 609 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 ELMSAN1Q6PJG2 1045 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 CERS6Q6ZMG9 384 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 TAS2R42Q7RTR8 314 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 PHTF2Q8N3S3 785 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 KCNJ9Q92806 393 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 OTUB2Q96DC9 234 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 CPEB1Q9BZB8 566 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 MCOLN1Q9GZU1 580 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 C1orf21Q9H246 121 aa21.22■□□□□ 0.99
UBE2D3-216ENST00000503742 TMEM233B4DJY2 109 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 ZNF197O14709 1029 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 KERAO60938 352 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 EPHA3P29320 983 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 MNAT1P51948 309 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 HERVK_113P63132 956 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms