RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 TMPRSS9Q7Z410 1059 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 TECPR1Q7Z6L1 1165 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 TRIM74Q86UV6 250 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 VASH2Q86V25 355 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 LUZP1Q86V48 1076 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 GALNT13Q8IUC8 556 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 SLITRK4Q8IW52 837 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 MAP7D3Q8IWC1 876 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 CBARPQ8N350 705 aaPredicted RBP10.68□□□□□ -0.7
SNCA-207ENST00000502987 NIPA2Q8N8Q9 360 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 CCNYQ8ND76 341 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 ZNF564Q8TBZ8 553 aaPredicted RBP10.68□□□□□ -0.7
SNCA-207ENST00000502987 PIH1D2Q8WWB5 315 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 PATE1Q8WXA2 126 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
SNCA-207ENST00000502987 SCAMP4Q969E2 229 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 SMIM14Q96QK8 99 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 OR2M4Q96R27 311 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 FAM117AQ9C073 453 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 CBX8Q9HC52 389 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 RBM22Q9NW64 420 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNCA-207ENST00000502987 KCNK4Q9NYG8 393 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 CTTNBP2NLQ9P2B4 639 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 RCOR3Q9P2K3 495 aaPredicted RBP10.68□□□□□ -0.7
SNCA-207ENST00000502987 PLEKHM1Q9Y4G2 1056 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 HEMK1Q9Y5R4 338 aaPredicted RBP10.68□□□□□ -0.7
SNCA-207ENST00000502987 BOD1L1Q8NFC6 3051 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 COL6A6A6NMZ7 2263 aa10.68□□□□□ -0.7
SNCA-207ENST00000502987 A0A087X0T9 212 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 A0A0J9YYE9 177 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 A0A1W2PQJ5 194 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 SYCE3A1L190 88 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 MATN3O15232 486 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 EFSO43281 561 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 SLC28A2O43868 658 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 MFSD11O43934 449 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 TRBC1P01850 177 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 PYGLP06737 847 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 IVLP07476 585 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 FAM228BP0C875 321 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 CCL4P13236 92 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 ZNF30P17039 623 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 CCNCP24863 283 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 MPSTP25325 297 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 CD1CP29017 333 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 CSTF2P33240 577 aaKnown RBP eCLIP10.67□□□□□ -0.7
SNCA-207ENST00000502987 GARSP41250 739 aaKnown RBP10.67□□□□□ -0.7
SNCA-207ENST00000502987 GPR3P46089 330 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 DSC2Q02487 901 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 SLC25A11Q02978 314 aaKnown RBP10.67□□□□□ -0.7
SNCA-207ENST00000502987 DPTQ07507 201 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 C16orf72Q14CZ0 275 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 ATP13A4Q4VNC1 1196 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 ANKRD20A8PQ5CZ79 823 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 PRICKLE2Q7Z3G6 844 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 NAGSQ8N159 534 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 TEX26Q8N6G2 289 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 CCDC112Q8NEF3 446 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 EXD1Q8NHP7 514 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 LRRN4Q8WUT4 740 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 EXTL1Q92935 676 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 CCDC74BQ96LY2 380 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 TAAR9Q96RI9 348 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 MCCC1Q96RQ3 725 aaPredicted RBP10.67□□□□□ -0.7
SNCA-207ENST00000502987 SLC38A3Q99624 504 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 NUDT22Q9BRQ3 303 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 RIOK2Q9BVS4 552 aaKnown RBP10.67□□□□□ -0.7
SNCA-207ENST00000502987 FOXJ2Q9P0K8 574 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 CAPN11Q9UMQ6 739 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 SLC17A4Q9Y2C5 497 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 PPIL1Q9Y3C6 166 aa10.67□□□□□ -0.7
SNCA-207ENST00000502987 IGHV5-10-1A0A0J9YXX1 117 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 C1orf232A0A0U1RR37 186 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 A8MU76 341 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 C9orf172C9J069 976 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 PPM1DO15297 605 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 CLDN7O95471 211 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 MX2P20592 715 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 IL4RP24394 825 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 CD82P27701 267 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 TEAD1P28347 426 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 LIMK2P53671 638 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 PTSQ03393 145 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 GALNT2Q10471 571 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 NFATC3Q12968 1075 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 DPYSL3Q14195 570 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 PAFAH1B3Q15102 231 aaKnown RBP10.66□□□□□ -0.7
SNCA-207ENST00000502987 PDK2Q15119 407 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 ODF2Q5BJF6 829 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 SNAP47Q5SQN1 464 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 NCBP2-AS2Q69YL0 99 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 ADAMTSL4Q6UY14 1074 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 ZNF574Q6ZN55 896 aaPredicted RBP10.66□□□□□ -0.7
SNCA-207ENST00000502987 CHST15Q7LFX5 561 aaPredicted RBP10.66□□□□□ -0.7
SNCA-207ENST00000502987 ZNF761Q86XN6 746 aaPredicted RBP10.66□□□□□ -0.7
SNCA-207ENST00000502987 FAM129CQ86XR2 697 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 NRSN1Q8IZ57 195 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 IL22RA1Q8N6P7 574 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 LPCAT1Q8NF37 534 aa10.66□□□□□ -0.7
SNCA-207ENST00000502987 CCHCR1Q8TD31 782 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms