RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 STC1P52823 247 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 MAPK10P53779 464 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 ACTR1AP61163 376 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 LRP8Q14114 963 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 NR1D2Q14995 579 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 KIAA1614Q5VZ46 1190 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 USP53Q70EK8 1073 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 GALNT13Q8IUC8 556 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 LPCAT1Q8NF37 534 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 EXD1Q8NHP7 514 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 TTC9Q92623 222 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 USP7Q93009 1102 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 SCAMP4Q969E2 229 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 SCARF2Q96GP6 870 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 DPYSL5Q9BPU6 564 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 TDRD1Q9BXT4 1180 aaKnown RBP11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 B3GNT4Q9C0J1 378 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 SEMA6CQ9H3T2 930 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 DEF6Q9H4E7 631 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 RDH14Q9HBH5 336 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 PCDH9Q9HC56 1237 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 ZNHIT6Q9NWK9 470 aaKnown RBP11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 TMEM98Q9Y2Y6 226 aa11.7□□□□□ -0.54
NUDCD3-211ENST00000497978 SCN8AQ9UQD0 1980 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 PRAMEF33A0A0G2JMD5 474 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 A0A0U1RQS6 177 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 HGSO14964 777 aaPredicted RBP11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 INPP4BO15327 924 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 PRAMEF10O60809 474 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 SOD1P00441 154 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 HLA-DQB2P05538 268 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 PTMSP20962 102 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 HNRNPH3P31942 346 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 MAN1A1P33908 653 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 PPM1FP49593 454 aaPredicted RBP11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 TAS2R40P59535 323 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 GBE1Q04446 702 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 TRIM14Q14142 442 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 LY6DQ14210 128 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 SLC18A3Q16572 532 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 PYCR3Q53H96 274 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 MANEAQ5SRI9 462 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 RFLNAQ6ZTI6 216 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 MARK2Q7KZI7 788 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 TMPRSS9Q7Z410 1059 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 CCDC13Q8IYE1 715 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 NAGSQ8N159 534 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 ZSCAN1Q8NBB4 408 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 CCDC112Q8NEF3 446 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 CCHCR1Q8TD31 782 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 FAF2Q96CS3 445 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 HDAC11Q96DB2 347 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 ANP32EQ9BTT0 268 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 RIOK2Q9BVS4 552 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 ADGRE3Q9BY15 652 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 ZMYND15Q9H091 742 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 KCNK4Q9NYG8 393 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 PKD2L2Q9NZM6 624 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 ZNHIT2Q9UHR6 403 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 NENFQ9UMX5 172 aa11.69□□□□□ -0.54
NUDCD3-211ENST00000497978 IGHV5-10-1A0A0J9YXX1 117 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 C1orf232A0A0U1RR37 186 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 PPM1DO15297 605 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 CBFA2T2O43439 604 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 AKR1B10O60218 316 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 CLDN7O95471 211 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 PRLP01236 227 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 JCHAINP01591 159 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 TPM1P09493 284 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 PLA2G2AP14555 144 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 KDELR1P24390 212 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 CD1CP29017 333 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 ETV5P41161 510 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 NIPAL4Q0D2K0 466 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 TRA2AQ13595 282 aaKnown RBP eCLIP11.68□□□□□ -0.545e-10■■■■■ 34.7
NUDCD3-211ENST00000497978 MESDQ14696 234 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 C16orf72Q14CZ0 275 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 TGIF1Q15583 401 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 TRIM74Q86UV6 250 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 CPNE8Q86YQ8 564 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 PQLC3Q8N755 202 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 OR4D9Q8NGE8 314 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 OR8K1Q8NGG5 319 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 ARRDC2Q8TBH0 407 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 PATE1Q8WXA2 126 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 SGF29Q96ES7 293 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 MED8Q96G25 268 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 AHCYL2Q96HN2 611 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 COX14Q96I36 57 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 CCDC74BQ96LY2 380 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 RNF157Q96PX1 679 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 SMIM14Q96QK8 99 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 LYSMD1Q96S90 227 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 NUDT22Q9BRQ3 303 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 MLPHQ9BV36 600 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 MAK16Q9BXY0 300 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 PACSIN1Q9BY11 444 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 XPO4Q9C0E2 1151 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 STN1Q9H668 368 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms