RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	TMEM168	Q9H0V1	697 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	CDH19	Q9H159	772 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	C7orf69	Q9H7B7	122 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	FGF22	Q9HCT0	170 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	PCDH12	Q9NPG4	1184 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	FAM8A1	Q9UBU6	413 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	MAN1B1	Q9UKM7	699 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	PCDHGA3	Q9Y5H0	932 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	B3GALT1	Q9Y5Z6	326 aa		10.86	□□□□□ -0.67
SKAP2-209	ENST00000497511	IGHV5-10-1	A0A0J9YXX1	117 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	BIN1	O00499	593 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	NKX2-8	O15522	239 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	TEX33	O43247	280 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	B4GAT1	O43505	415 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	AGFG2	O95081	481 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	FGF3	P11487	239 aa	Predicted RBP	10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	MAP4	P27816	1152 aa	Known RBP	10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	KIAA1024L	P59773	190 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	B4GALNT1	Q00973	533 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	ILF3	Q12906	894 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	PAK1	Q13153	545 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	TRA2A	Q13595	282 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	CLPP	Q16740	277 aa	Predicted RBP	10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	UGP2	Q16851	508 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	DEFB109B	Q30KR1	87 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	DCAF12	Q5T6F0	453 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	TAF3	Q5VWG9	929 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	KCTD16	Q68DU8	428 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	KDELC2	Q7Z4H8	507 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	TRIM42	Q8IWZ5	723 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	TEX19	Q8NA77	164 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	PLA2G15	Q8NCC3	412 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	CCL4L1	Q8NHW4	92 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	SPATA20	Q8TB22	786 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	APOBEC4	Q8WW27	367 aa	Known RBP	10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	EFHD1	Q9BUP0	239 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	RETREG1	Q9H6L5	497 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	C12orf49	Q9H741	205 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	WDR26	Q9H7D7	661 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	CARS2	Q9HA77	564 aa	Known RBP	10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	TMEM248	Q9NWD8	314 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	DNAJC12	Q9UKB3	198 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	RNF112	Q9ULX5	631 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	ATP8A1	Q9Y2Q0	1164 aa		10.85	□□□□□ -0.67
SKAP2-209	ENST00000497511	USP9X	Q93008	2570 aa	Predicted RBP	10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	PRR19	A6NJB7	356 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	ENO4	A6NNW6	628 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	EFCAB7	A8K855	629 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	INSIG1	O15503	277 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	MTSS1	O43312	755 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	PRKCG	P05129	697 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	CTSB	P07858	339 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	GSTP1	P09211	210 aa	Known RBP	10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	ELFN1	P0C7U0	828 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	PNMA6A	P0CW24	399 aa	Predicted RBP	10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	DRD2	P14416	443 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	MAN1A1	P33908	653 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	ADRA1B	P35368	520 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	COPB1	P53618	953 aa	Known RBP	10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	KLRB1	Q12918	225 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	GRM3	Q14832	879 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	C2CD6	Q53TS8	623 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	HIST2H2BC	Q6DN03	193 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	BRAT1	Q6PJG6	821 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	FOXR2	Q6PJQ5	311 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	PHLDB2	Q86SQ0	1253 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	NLRP14	Q86W24	1093 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	XYLT1	Q86Y38	959 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	DNAAF5	Q86Y56	855 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	EMC1	Q8N766	993 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	FUBP1	Q96AE4	644 aa	Known RBP	10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	SLC45A3	Q96JT2	553 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	DDA1	Q9BW61	102 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	GSDMC	Q9BYG8	508 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	METTL5	Q9NRN9	209 aa	Known RBP	10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	ZDHHC9	Q9Y397	364 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	MFHAS1	Q9Y4C4	1052 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	ZFC3H1	O60293	1989 aa	Known RBP	10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	UNC13C	Q8NB66	2214 aa		10.84	□□□□□ -0.67
SKAP2-209	ENST00000497511	USP9Y	O00507	2555 aa	Predicted RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	PRSS38	A1L453	326 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	HMX2	A2RU54	273 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	CLEC18A	A5D8T8	446 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	FOXN3	O00409	490 aa	Predicted RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	TNFRSF10C	O14798	259 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	DUX1	O43812	170 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	VPS4B	O75351	444 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	RECQL5	O94762	991 aa	Predicted RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	LRIG2	O94898	1065 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	ECEL1	O95672	775 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	PLEK	P08567	350 aa	Predicted RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	CCNB1	P14635	433 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	SDC4	P31431	198 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	MMP12	P39900	470 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	STAT1	P42224	750 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	GABRB2	P47870	512 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	LIMK2	P53671	638 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	MC1R	Q01726	317 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	CDC20	Q12834	499 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms