RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 SMYD2Q9NRG4 433 aa18.18■□□□□ 0.5
RGP1-202ENST00000496906 MBD1Q9UIS9 605 aaPredicted RBP18.18■□□□□ 0.5
RGP1-202ENST00000496906 FBXO4Q9UKT5 387 aa18.18■□□□□ 0.5
RGP1-202ENST00000496906 SLC30A1Q9Y6M5 507 aa18.18■□□□□ 0.5
RGP1-202ENST00000496906 PLXNA2O75051 1894 aa18.18■□□□□ 0.5
RGP1-202ENST00000496906 GPR39O43194 453 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 PAK4O96013 591 aaPredicted RBP18.17■□□□□ 0.5
RGP1-202ENST00000496906 NUDT17P0C025 328 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 CCR5P51681 352 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 CACNG1Q06432 222 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 SGCGQ13326 291 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 NFATC2Q13469 925 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 THOC5Q13769 683 aaKnown RBP18.17■□□□□ 0.5
RGP1-202ENST00000496906 KBTBD12Q3ZCT8 623 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 TEDDM1Q5T9Z0 273 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 KIAA0895LQ68EN5 471 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 NEPROQ6NW34 567 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 SNX20Q7Z614 316 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 NLRP8Q86W28 1048 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 CNTN4Q8IWV2 1026 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 TP53I13Q8NBR0 393 aaPredicted RBP18.17■□□□□ 0.5
RGP1-202ENST00000496906 AGAP2Q99490 1192 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 FAM167BQ9BTA0 163 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 ZSCAN5AQ9BUG6 496 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 SPATA16Q9BXB7 569 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 IARS2Q9NSE4 1012 aaKnown RBP18.17■□□□□ 0.5
RGP1-202ENST00000496906 CATSPERZQ9NTU4 200 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 MARCH4Q9P2E8 410 aaPredicted RBP18.17■□□□□ 0.5
RGP1-202ENST00000496906 INVSQ9Y283 1065 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 AGAP14A8MT82 685 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 CXorf49A8MYA2 514 aaPredicted RBP18.17■□□□□ 0.5
RGP1-202ENST00000496906 CD3EAPO15446 510 aaKnown RBP18.17■□□□□ 0.5
RGP1-202ENST00000496906 PIAS1O75925 651 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 SOD1P00441 154 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 IGHV4-34P06331 123 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 PRSS56P0CW18 603 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 ITGALP20701 1170 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 EFTUD2Q15029 972 aaKnown RBP eCLIP18.17■□□□□ 0.56e-6■■■□□ 18.7
RGP1-202ENST00000496906 WSCD2Q2TBF2 565 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 FASTKD1Q53R41 847 aaKnown RBP18.17■□□□□ 0.5
RGP1-202ENST00000496906 ZRANB3Q5FWF4 1079 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 ZNF470Q6ECI4 717 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 PSAPL1Q6NUJ1 521 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 LONP2Q86WA8 852 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 LMNTD2Q8IXW0 634 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 PIANPQ8IYJ0 282 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 PELI3Q8N2H9 469 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 GPR150Q8NGU9 434 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 ZNF398Q8TD17 642 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 CALML6Q8TD86 181 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 CDKL2Q92772 493 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 CYTH2Q99418 400 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 C1QTNF7Q9BXJ2 289 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 PCED1AQ9H1Q7 454 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 ASB8Q9H765 288 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 ZFATQ9P243 1243 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 SLC17A6Q9P2U8 582 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 PLXND1Q9Y4D7 1925 aa18.17■□□□□ 0.5
RGP1-202ENST00000496906 TRBV5-4A0A0C4DH59 114 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 FADS2P1A8MWK0 482 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 K7ESM1 405 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 DLL1O00548 723 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 SLC31A1O15431 190 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A9O60656 530 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 NDUFS2O75306 463 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 SHBGP04278 402 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A6P19224 532 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A1P22309 533 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A4P22310 534 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 CA5AP35218 305 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A3P35503 534 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A5P35504 534 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 CDKN1CP49918 316 aaPredicted RBP18.16■□□□□ 0.5
RGP1-202ENST00000496906 ITGA9Q13797 1035 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 SEMA3AQ14563 771 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 LRRC14Q15048 493 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 GPR33Q49SQ1 333 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 ATP13A5Q4VNC0 1218 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 SETMARQ53H47 684 aaPredicted RBP18.16■□□□□ 0.5
RGP1-202ENST00000496906 SLC36A4Q6YBV0 504 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 CILP2Q8IUL8 1156 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 CENPTQ96BT3 561 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 KLF6Q99612 283 aaPredicted RBP18.16■□□□□ 0.5
RGP1-202ENST00000496906 FAM96AQ9H5X1 160 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A7Q9HAW7 530 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A10Q9HAW8 530 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 UGT1A8Q9HAW9 530 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 SMOXQ9NWM0 555 aa18.16■□□□□ 0.5
RGP1-202ENST00000496906 EML5Q05BV3 1969 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 PRR33A8MZF0 331 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 RAD51BO15315 384 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 FSBPO95073 299 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 OGNP20774 298 aaKnown RBP18.15■□□□□ 0.5
RGP1-202ENST00000496906 BCKDHBP21953 392 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 SLC1A2P43004 574 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 RPL6Q02878 288 aaKnown RBP18.15■□□□□ 0.5
RGP1-202ENST00000496906 STAT4Q14765 748 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 CASP8Q14790 479 aa18.15■□□□□ 0.5
RGP1-202ENST00000496906 IRF4Q15306 451 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms