RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SP1P08047 785 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 TCEA1P23193 301 aaKnown RBP5.53□□□□□ -1.52
SF3B1-212ENST00000496458 CASP6P55212 293 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 ISL1P61371 349 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 CCDC96Q2M329 555 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 ACCSLQ4AC99 568 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 CXorf66Q5JRM2 361 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-212ENST00000496458 FRG2Q64ET8 278 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 TRNP1Q6NT89 227 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 BEST3Q8N1M1 668 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 CIARTQ8N365 385 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-212ENST00000496458 RHBDF1Q96CC6 855 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 PPP1R13BQ96KQ4 1090 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 ACOX2Q99424 681 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 SEC62Q99442 399 aaKnown RBP5.53□□□□□ -1.52
SF3B1-212ENST00000496458 JMJD4Q9H9V9 463 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 ZFP57Q9NU63 452 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 ACSS1Q9NUB1 689 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-212ENST00000496458 ABI3Q9P2A4 366 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 OR2W1Q9Y3N9 320 aa5.53□□□□□ -1.52
SF3B1-212ENST00000496458 A0A1W2PPH5 198 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 LILRA5A6NI73 299 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 P2RY10O00398 339 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 SPINT2O43291 252 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 SH3BP5O60239 455 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 ZNF182P17025 639 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-212ENST00000496458 FMO5P49326 533 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 TAS2R38P59533 333 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 OLR1P78380 273 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 TMEM115Q12893 351 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-212ENST00000496458 OLIG2Q13516 323 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 DCTN2Q13561 401 aaKnown RBP5.52□□□□□ -1.53
SF3B1-212ENST00000496458 OTUD3Q5T2D3 398 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-212ENST00000496458 STXBP5Q5T5C0 1151 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 CACNA2D4Q7Z3S7 1137 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 IL17RCQ8NAC3 791 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 OR14L1PQ8NHC6 308 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 SMARCE1Q969G3 411 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 IGSF8Q969P0 613 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 INTS12Q96CB8 462 aaKnown RBP5.52□□□□□ -1.53
SF3B1-212ENST00000496458 RRNAD1Q96FB5 475 aaKnown RBP5.52□□□□□ -1.53
SF3B1-212ENST00000496458 PADI3Q9ULW8 664 aa5.52□□□□□ -1.53
SF3B1-212ENST00000496458 A0A1W2PS18 150 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 FAM172BPA6NC97 362 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 FGF17O60258 216 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 PAX3P23760 479 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 MARK3P27448 753 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 RPL7AP62424 266 aaKnown RBP5.51□□□□□ -1.53
SF3B1-212ENST00000496458 PHEXP78562 749 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 SETQ01105 290 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-212ENST00000496458 TBX2Q13207 712 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-212ENST00000496458 FRG1Q14331 258 aaKnown RBP5.51□□□□□ -1.53
SF3B1-212ENST00000496458 DPCR1Q3MIW9 517 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 BRAT1Q6PJG6 821 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 TRMT1LQ7Z2T5 733 aaKnown RBP5.51□□□□□ -1.53
SF3B1-212ENST00000496458 NME8Q8N427 588 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 ACVR1CQ8NER5 493 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 IL17REQ8NFR9 667 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 LRRC8CQ8TDW0 803 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 PIGTQ969N2 578 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 MMABQ96EY8 250 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-212ENST00000496458 HARBI1Q96MB7 349 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 TMEM68Q96MH6 324 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 QRFPRQ96P65 431 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 SYT17Q9BSW7 474 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 STRA6Q9BX79 667 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 RANBP17Q9H2T7 1088 aaKnown RBP5.51□□□□□ -1.53
SF3B1-212ENST00000496458 SCPEP1Q9HB40 452 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 TAAR2Q9P1P5 351 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 PGAP2Q9UHJ9 254 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 ADAM18Q9Y3Q7 739 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 MYO15BQ96JP2 1530 aa5.51□□□□□ -1.53
SF3B1-212ENST00000496458 PTPRCP08575 1304 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 DCAF1Q9Y4B6 1507 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 PRR23AA6NEV1 266 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 CAPN9O14815 690 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 PAGE4O60829 102 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 SOCS5O75159 536 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 F2RL1P55085 397 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 PITX1P78337 314 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-212ENST00000496458 CCNG2Q16589 344 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 DCST1Q5T197 706 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 ASB18Q6ZVZ8 466 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 SRBD1Q8N5C6 995 aaKnown RBP5.5□□□□□ -1.53
SF3B1-212ENST00000496458 DMBX1Q8NFW5 382 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 OR5R1Q8NH85 324 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 KCNG4Q8TDN1 519 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 APBB2Q92870 758 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 PDCL3Q9H2J4 239 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 FBRSL1Q9HCM7 1045 aaKnown RBP5.5□□□□□ -1.53
SF3B1-212ENST00000496458 DLGAP2Q9P1A6 1054 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 KLHL20Q9Y2M5 609 aa5.5□□□□□ -1.53
SF3B1-212ENST00000496458 WDR1O75083 606 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 SLC22A3O75751 556 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 SPARCP09486 303 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 HOXC9P31274 260 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 PBX3P40426 434 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 RGS2P41220 211 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 FASLGP48023 281 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 CCR9P51686 369 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms