RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	OR13H1	Q8NG92	308 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	OR52K1	Q8NGK4	314 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	GRK7	Q8WTQ7	553 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	ADAMTS14	Q8WXS8	1223 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	CPT1B	Q92523	772 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	SRPK1	Q96SB4	655 aa	Known RBP	11.86	□□□□□ -0.51
APTX-233	ENST00000496030	KRT12	Q99456	494 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	AGAP2	Q99490	1192 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	TRABD	Q9H4I3	376 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	CAAP1	Q9H8G2	361 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	AASDHPPT	Q9NRN7	309 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	PIH1D1	Q9NWS0	290 aa	Known RBP	11.86	□□□□□ -0.51
APTX-233	ENST00000496030	HACD3	Q9P035	362 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	IL17C	Q9P0M4	197 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	CD84	Q9UIB8	345 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	ANKRD6	Q9Y2G4	727 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	KCTD3	Q9Y597	815 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	SNX11	Q9Y5W9	270 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	MRFAP1	Q9Y605	127 aa		11.86	□□□□□ -0.51
APTX-233	ENST00000496030	TP53BP1	Q12888	1972 aa	Predicted RBP	11.86	□□□□□ -0.51
APTX-233	ENST00000496030	TMEM131	Q92545	1883 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	RGSL1	A5PLK6	1076 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	GOLGA6C	A6NDK9	693 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	GOLGA6B	A6NDN3	693 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	ARHGAP33	O14559	1287 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	FPGT	O14772	594 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	TP73	O15350	636 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	TTI1	O43156	1089 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	LDB2	O43679	373 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	BUD23	O43709	281 aa	Known RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	SH3BP5	O60239	455 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	GAS8	O95995	478 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	FTH1P19	P0C7X4	201 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	GOLGA6D	P0CG33	693 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	PLA2G2A	P14555	144 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	BPI	P17213	487 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	TPSB2	P20231	275 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	PSMA3	P25788	255 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	NXPH1	P58417	271 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	MRPS25	P82663	173 aa	Known RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	DR1	Q01658	176 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	C2orf54	Q08AI8	447 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	OVGP1	Q12889	678 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	GRIK2	Q13002	908 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	TRIP6	Q15654	476 aa	Known RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	TPSAB1	Q15661	275 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	WHAMMP3	Q1A5X7	153 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	CERCAM	Q5T4B2	595 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	ESRP1	Q6NXG1	681 aa	Known RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	PNCK	Q6P2M8	343 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	KYAT3	Q6YP21	454 aa	Known RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	LINC00523	Q86TU6	105 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	JAML	Q86YT9	394 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	MINDY1	Q8N5J2	469 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	KIF18A	Q8NI77	898 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	BRSK1	Q8TDC3	778 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	BLOC1S5	Q8TDH9	187 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	NUS1	Q96E22	293 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	KLHDC7B	Q96G42	594 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	RIOK2	Q9BVS4	552 aa	Known RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	C1QTNF7	Q9BXJ2	289 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	GPR63	Q9BZJ6	419 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	KCTD5	Q9NXV2	234 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	GOLGA6A	Q9NYA3	693 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	CNOT6	Q9ULM6	557 aa	Known RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.85	□□□□□ -0.51
APTX-233	ENST00000496030	ARL5A	Q9Y689	179 aa		11.85	□□□□□ -0.51
APTX-233	ENST00000496030	MROH6	A6NGR9	719 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030		A6NNZ2	444 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030		E7EVH7	732 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	GAPDHS	O14556	408 aa	Predicted RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	ZNF500	O60304	480 aa	Predicted RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	TMEM63A	O94886	807 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	THEGL	P0DJG4	465 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	TEAD1	P28347	426 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	ATXN3	P54252	364 aa	Predicted RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	BASP1	P80723	227 aa	Known RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	CDK16	Q00536	496 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	CDH17	Q12864	832 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	MTM1	Q13496	603 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	PPP1R7	Q15435	360 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	SHB	Q15464	509 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	TEAD4	Q15561	434 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	TAF1A	Q15573	450 aa	Predicted RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	PRAMEF14	Q5SWL7	426 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	HENMT1	Q5T8I9	393 aa	Known RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	KCTD16	Q68DU8	428 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	MICALCL	Q6ZW33	695 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	CAND1	Q86VP6	1230 aa	Known RBP	11.84	□□□□□ -0.51
APTX-233	ENST00000496030	MARCH9	Q86YJ5	346 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	NAT8L	Q8N9F0	302 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	FAM174A	Q8TBP5	190 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	CCHCR1	Q8TD31	782 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	AP2M1	Q96CW1	435 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	RUNDC3B	Q96NL0	473 aa		11.84	□□□□□ -0.51
APTX-233	ENST00000496030	TRIM51	Q9BSJ1	452 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms