RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SDK2Q58EX2 2172 aa11.78□□□□□ -0.52
CSNK1E-212ENST00000494610 WASH4PA8MWX3 477 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 HACD1B0YJ81 288 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 TM7SF2O76062 418 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 TUBBP07437 444 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 CD48P09326 243 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 JMJD7P0C870 316 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 CTSEP14091 401 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 RHOQP17081 205 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 MCM3P25205 808 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 ETFBP38117 255 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 TLE1Q04724 770 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 SLC20A2Q08357 652 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 XRCC4Q13426 336 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 INPP5AQ14642 412 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 PAFAH1B3Q15102 231 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 IGFBP7Q16270 282 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 MANEAQ5SRI9 462 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 ATG14Q6ZNE5 492 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 NLRP14Q86W24 1093 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 LRRC49Q8IUZ0 686 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 CDKL3Q8IVW4 592 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 MMGT1Q8N4V1 131 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 CXorf40AQ8TE69 158 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 ASB12Q8WXK4 309 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 UBXN4Q92575 508 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 MAGOHBQ96A72 148 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 HEMGNQ9BXL5 484 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 LRRC19Q9H756 370 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 RDH14Q9HBH5 336 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 RNF215Q9Y6U7 377 aa11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 ARHGEF17Q96PE2 2063 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-212ENST00000494610 FAM187AA6NFU0 413 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 MTSS1O43312 755 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 TMCC1O94876 653 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 ECEL1O95672 775 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 PCCBP05166 539 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 LIPCP11150 499 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 CCL4P13236 92 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 ERCC2P18074 760 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 ARSDP51689 593 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 TERF1P54274 439 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 SRP54P61011 504 aaKnown RBP11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 YPEL5P62699 121 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 DYNLT1P63172 113 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 C2orf54Q08AI8 447 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 C16orf72Q14CZ0 275 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 PDK1Q15118 436 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 NOMO1Q15155 1222 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 SKIDA1Q1XH10 827 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 NCBP2-AS2Q69YL0 99 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 AADACL2Q6P093 401 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 ZNF783Q6ZMS7 281 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 ZSWIM9Q86XI8 627 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 CCNJLQ8IV13 435 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 PYROXD2Q8N2H3 581 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 PELI3Q8N2H9 469 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 RTL3Q8N8U3 475 aaKnown RBP11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 RCBTB1Q8NDN9 531 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 OR1E3Q8WZA6 343 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 SLCO2A1Q92959 643 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 RAB7BQ96AH8 199 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 ISG20Q96AZ6 181 aaKnown RBP11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 AP1M1Q9BXS5 423 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 RAB17Q9H0T7 212 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 NOL6Q9H6R4 1146 aaKnown RBP11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 SUDS3Q9H7L9 328 aaPredicted RBP11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 HAUS2Q9NVX0 235 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 PCYOX1Q9UHG3 505 aa11.76□□□□□ -0.53
CSNK1E-212ENST00000494610 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 TMEM202A6NGA9 273 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 NVLO15381 856 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 LIASO43766 372 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 STK10O94804 968 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 POP4O95707 220 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 GSRP00390 522 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 IL4RP24394 825 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 CCKBRP32239 447 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 SNRPD1P62314 119 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 DR1Q01658 176 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 OTUD4Q01804 1114 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 ZFP36L1Q07352 338 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 LRRC14Q15048 493 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 POLD3Q15054 466 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 ELOCQ15369 112 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 SIX1Q15475 284 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 TEX35Q5T0J7 233 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 PHF19Q5T6S3 580 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 CCDC137Q6PK04 289 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 DTX1Q86Y01 620 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 ZNF354CQ86Y25 554 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 PQLC3Q8N755 202 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 PLD5Q8N7P1 536 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 PRELID2Q8N945 189 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 GPR156Q8NFN8 814 aa11.75□□□□□ -0.53
CSNK1E-212ENST00000494610 MYRIPQ8NFW9 859 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms