RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	LGALS16	A8MUM7	142 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	PSMD11	O00231	422 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	INPP4B	O15327	924 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	PRPSAP2	O60256	369 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	LRCH4	O75427	683 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	ATP1A1	P05023	1023 aa	Known RBP	13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	TPM2	P07951	284 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	F8A1	P23610	371 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	UBXN1	Q04323	297 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	NCAPH	Q15003	741 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	LRRC66	Q68CR7	880 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	C16orf46	Q6P387	395 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	OR10G6	Q8NH81	332 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	STARD8	Q92502	1023 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	NCSTN	Q92542	709 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	TEFM	Q96QE5	360 aa	Known RBP	13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	KCTD5	Q9NXV2	234 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	TBC1D29	Q9UFV1	150 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	KLHL3	Q9UH77	587 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	LIMA1	Q9UHB6	759 aa	Known RBP	13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	PPIL1	Q9Y3C6	166 aa		13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	OAS3	Q9Y6K5	1087 aa	Known RBP	13.6	□□□□□ -0.23
SAMM50-204	ENST00000493161	LRRK2	Q5S007	2527 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161		A0A1W2PQ67	120 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	PRR19	A6NJB7	356 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	CAPN5	O15484	640 aa	Predicted RBP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	DNAJC6	O75061	913 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	STK17B	O94768	372 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	DLGAP3	O95886	979 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	DES	P17661	470 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	MAPK9	P45984	424 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	HHEX	Q03014	270 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	PEX6	Q13608	980 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	SMTNL2	Q2TAL5	461 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	ARMC12	Q5T9G4	340 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	HIST2H2BC	Q6DN03	193 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	WDR74	Q6RFH5	385 aa	Predicted RBP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	USP45	Q70EL2	814 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	CHST15	Q7LFX5	561 aa	Predicted RBP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	APTX	Q7Z2E3	356 aa	Known RBP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	GALNT13	Q8IUC8	556 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	LZTR1	Q8N653	840 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	APOBEC4	Q8WW27	367 aa	Known RBP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	COX14	Q96I36	57 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	PSMG3-AS1	Q96PY0	264 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	ERGIC2	Q96RQ1	377 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	RIOK2	Q9BVS4	552 aa	Known RBP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	FBXO8	Q9NRD0	319 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	ZNHIT2	Q9UHR6	403 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	KCNK6	Q9Y257	313 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	TP53TG5	Q9Y2B4	290 aa		13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	SPEN	Q96T58	3664 aa	Known RBP	13.59	□□□□□ -0.23
SAMM50-204	ENST00000493161	NBAS	A2RRP1	2371 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161		A6NCN8	305 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	MTSS1	O43312	755 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	FZD6	O60353	706 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	RNF8	O76064	485 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	NTRK1	P04629	796 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	FURIN	P09958	794 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	FER	P16591	822 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	HSPA9	P38646	679 aa	Known RBP	13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	MMP13	P45452	471 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	ABHD18	Q0P651	414 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	LACTB2	Q53H82	288 aa	Predicted RBP	13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	TXNRD3NB	Q6F5E7	133 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	IYD	Q6PHW0	289 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	TMCO3	Q6UWJ1	677 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	CEACAM20	Q6UY09	585 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	KDELC2	Q7Z4H8	507 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	POLN	Q7Z5Q5	900 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	PSTK	Q8IV42	348 aa	Known RBP	13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	FAM26E	Q8N5C1	309 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	HSPH1	Q92598	858 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	MIB2	Q96AX9	1013 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	CSPG4P5	Q96PW8	444 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	WDR24	Q96S15	920 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	TBC1D10A	Q9BXI6	508 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	ZWILCH	Q9H900	591 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	NT5M	Q9NPB1	228 aa		13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	CNOT6	Q9ULM6	557 aa	Known RBP	13.58	□□□□□ -0.24
SAMM50-204	ENST00000493161	TEX15	Q9BXT5	2789 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	BLACE	A4D250	179 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161		H3BRJ5	948 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	SNX2	O60749	519 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	ASMTL	O95671	621 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	ACP5	P13686	325 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	ZNF28	P17035	718 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	TCN2	P20062	427 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	STAT5A	P42229	794 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	STC1	P52823	247 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	MLLT10	P55197	1068 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	GFER	P55789	205 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	LRP8	Q14114	963 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	DPYSL2	Q16555	572 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	MARC1	Q5VT66	337 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	TMEM135	Q86UB9	458 aa		13.57	□□□□□ -0.24
SAMM50-204	ENST00000493161	ATPAF2	Q8N5M1	289 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms