RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC3-208	ENST00000491292	GPR42	O15529	346 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	NDUFS2	O75306	463 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	C8B	P07358	591 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	AGXT	P21549	392 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	MYF6	P23409	242 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	GABRB3	P28472	473 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	HPCAL1	P37235	193 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	MAP2K4	P45985	399 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	GLUD2	P49448	558 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	CTBS	Q01459	385 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	DMC1	Q14565	340 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	RFTN1	Q14699	578 aa	Predicted RBP	9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	SPCS2	Q15005	226 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	CELF3	Q5SZQ8	465 aa	Known RBP	9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	ANKS6	Q68DC2	871 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	P3H2	Q8IVL5	708 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	ATG16L2	Q8NAA4	619 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	B3GALNT2	Q8NCR0	500 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	ZFP90	Q8TF47	636 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	C17orf50	Q8WW18	174 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	APOL5	Q9BWW9	433 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	TOR3A	Q9H497	397 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	PRDM8	Q9NQV8	689 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	INTS7	Q9NVH2	962 aa	Known RBP	9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	CMTM6	Q9NX76	183 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	SLAMF8	Q9P0V8	285 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	FAM8A1	Q9UBU6	413 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	KCTD3	Q9Y597	815 aa		9.8	□□□□□ -0.84
ERCC3-208	ENST00000491292	MSI1	O43347	362 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CYP7B1	O75881	506 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	BEST1	O76090	585 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CYP2C9	P11712	490 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	S100A1	P23297	94 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	MAGEA6	P43360	314 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	KCNJ8	Q15842	424 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	IL27RA	Q6UWB1	636 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ANKFN1	Q8N957	763 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	FLAD1	Q8NFF5	587 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	METTL6	Q8TCB7	284 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	MCOLN3	Q8TDD5	553 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	MTFMT	Q96DP5	389 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TEKT5	Q96M29	485 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	GPR20	Q99678	358 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	HGH1	Q9BTY7	390 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	MAF1	Q9H063	256 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	OSBPL2	Q9H1P3	480 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	NHS	Q6T4R5	1651 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	PRRC2B	Q5JSZ5	2229 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TNRC6C	Q9HCJ0	1690 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	AQP12B	A6NM10	295 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TNPO2	O14787	897 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	IDH3B	O43837	385 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	SLC22A3	O75751	556 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	BMP2	P12643	396 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	PLA2G16	P53816	162 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	FOXA1	P55317	472 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CCDC85B	Q15834	202 aa	Predicted RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ZNF773	Q6PK81	442 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ITIH5	Q86UX2	942 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TICAM1	Q8IUC6	712 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	AQP12A	Q8IXF9	295 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CNIH3	Q8TBE1	160 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ANKRD49	Q8WVL7	239 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TBATA	Q96M53	351 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	OLFM1	Q99784	485 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	NEURL2	Q9BR09	285 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	SLC2A11	Q9BYW1	496 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CASS4	Q9NQ75	786 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CNOT11	Q9UKZ1	510 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ZNFX1	Q9P2E3	1918 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	NUP214	P35658	2090 aa	Predicted RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TCRBV3S1	A0A5B6	114 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ENPP3	O14638	875 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	SLC22A2	O15244	555 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	NCAM2	O15394	837 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	PSMD3	O43242	534 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	GAS2	O43903	313 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	BCAS1	O75363	584 aa	Predicted RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CCNK	O75909	580 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	NPR3	P17342	541 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CD68	P34810	354 aa	Predicted RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	GMPS	P49915	693 aa	Predicted RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ST13	P50502	369 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CCT8	P50990	548 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	NUDT8	Q8WV74	236 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TRUB1	Q8WWH5	349 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	KHSRP	Q92945	711 aa	Known RBP eCLIP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ULK4	Q96C45	1275 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	CEP44	Q9C0F1	390 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ZNF408	Q9H9D4	720 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ENTPD7	Q9NQZ7	604 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	TRMT13	Q9NUP7	481 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	MRGBP	Q9NV56	204 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	SCHIP1	Q9P0W5	487 aa	Predicted RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	ADGRE2	Q9UHX3	823 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	PTBP2	Q9UKA9	531 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	UBQLN1	Q9UMX0	589 aa	Known RBP	9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	PCDHB3	Q9Y5E6	796 aa		9.79	□□□□□ -0.84
ERCC3-208	ENST00000491292	KLRG2	A4D1S0	409 aa	Predicted RBP	9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms