RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 TECPR1Q7Z6L1 1165 aa20.69■□□□□ 0.9
NELFE-210ENST00000491139 TSPAN33Q86UF1 283 aa20.69■□□□□ 0.9
NELFE-210ENST00000491139 GALNT13Q8IUC8 556 aa20.69■□□□□ 0.9
NELFE-210ENST00000491139 AP2M1Q96CW1 435 aa20.69■□□□□ 0.9
NELFE-210ENST00000491139 KCTD15Q96SI1 283 aaPredicted RBP20.69■□□□□ 0.9
NELFE-210ENST00000491139 STN1Q9H668 368 aaKnown RBP20.69■□□□□ 0.9
NELFE-210ENST00000491139 NOD2Q9HC29 1040 aa20.69■□□□□ 0.9
NELFE-210ENST00000491139 CD84Q9UIB8 345 aa20.69■□□□□ 0.9
NELFE-210ENST00000491139 RPS6KL1Q9Y6S9 549 aa20.69■□□□□ 0.9
NELFE-210ENST00000491139 SOD1P00441 154 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 KRT7P08729 469 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 NR1D1P20393 614 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 NFATC2Q13469 925 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 MAP7Q14244 749 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 PTPRRQ15256 657 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 PPP6R3Q5H9R7 873 aaPredicted RBP20.68■□□□□ 0.9
NELFE-210ENST00000491139 FKBP15Q5T1M5 1219 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 FNIP1Q8TF40 1166 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 SH3KBP1Q96B97 665 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 MCCC1Q96RQ3 725 aaPredicted RBP20.68■□□□□ 0.9
NELFE-210ENST00000491139 SNRNP25Q9BV90 132 aaKnown RBP20.68■□□□□ 0.9
NELFE-210ENST00000491139 SARS2Q9NP81 518 aaKnown RBP20.68■□□□□ 0.9
NELFE-210ENST00000491139 KLHL3Q9UH77 587 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 PCSK1NQ9UHG2 260 aa20.68■□□□□ 0.9
NELFE-210ENST00000491139 MRPS18BQ9Y676 258 aaKnown RBP20.68■□□□□ 0.9
NELFE-210ENST00000491139 EML2O95834 649 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 TPM2P07951 284 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 PSMA2P25787 234 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 TRAF2Q12933 501 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 TRIM74Q86UV6 250 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 TP53INP2Q8IXH6 220 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 CCDC13Q8IYE1 715 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 MCOLN2Q8IZK6 566 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 BBS5Q8N3I7 341 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 AGPAT1Q99943 283 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 ABCG8Q9H221 673 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 CLSTN2Q9H4D0 955 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 PRDM8Q9NQV8 689 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 LMBRD1Q9NUN5 540 aa20.67■□□□□ 0.9
NELFE-210ENST00000491139 CENPEQ02224 2701 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 K7EM74 188 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 PGLSO95336 258 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 PYGLP06737 847 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 CTPS1P17812 591 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 TNFAIP3P21580 790 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 F8A1P23610 371 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 MAPK9P45984 424 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 HCAR3P49019 387 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 EPHA4P54764 986 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 ARMC12Q5T9G4 340 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 HIST2H2BCQ6DN03 193 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 ACAD10Q6JQN1 1059 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 RFLNAQ6ZTI6 216 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 ASB18Q6ZVZ8 466 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 PGBD5Q8N414 524 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 SCAMP4Q969E2 229 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 PEBP4Q96S96 227 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 MGME1Q9BQP7 344 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 ULBP3Q9BZM4 244 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 PLEKHB1Q9UF11 243 aaPredicted RBP20.66■□□□□ 0.9
NELFE-210ENST00000491139 ZNHIT2Q9UHR6 403 aa20.66■□□□□ 0.9
NELFE-210ENST00000491139 A0A0U1RQS6 177 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 VPS4BO75351 444 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 AGFG2O95081 481 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 ASMTLO95671 621 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 DLSTP36957 453 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 ZNF135P52742 658 aaPredicted RBP20.65■□□□□ 0.9
NELFE-210ENST00000491139 RALGPS1Q5JS13 557 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 LRRC66Q68CR7 880 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 IYDQ6PHW0 289 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 SLC9B2Q86UD5 537 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 NLRP8Q86W28 1048 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 NDUFAF2Q8N183 169 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 ARFGAP1Q8N6T3 406 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.65■□□□□ 0.9
NELFE-210ENST00000491139 EPB41L1Q9H4G0 881 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 CWC15Q9P013 229 aaKnown RBP20.65■□□□□ 0.9
NELFE-210ENST00000491139 TBC1D29Q9UFV1 150 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 VPS4AQ9UN37 437 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 POLHQ9Y253 713 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 SIK3Q9Y2K2 1263 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 PPIL1Q9Y3C6 166 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 ITPR2Q14571 2701 aa20.65■□□□□ 0.9
NELFE-210ENST00000491139 NBPF19A0A087WUL8 3843 aa20.64■□□□□ 0.9
NELFE-210ENST00000491139 GOLGA6L22H0YM25 854 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 PRPSAP2O60256 369 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 RNF8O76064 485 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 PEX11BO96011 259 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 MAXP61244 160 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 FOXM1Q08050 763 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 MAMLD1Q13495 774 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 DPYSQ14117 519 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 ERV3-1Q14264 604 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 KRT31Q15323 416 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 CT47A1Q5JQC4 288 aaPredicted RBP20.64■□□□□ 0.89
NELFE-210ENST00000491139 FHL5Q5TD97 284 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 C6orf15Q6UXA7 325 aaPredicted RBP20.64■□□□□ 0.89
NELFE-210ENST00000491139 ZNF765Q7L2R6 523 aa20.64■□□□□ 0.89
NELFE-210ENST00000491139 CHST15Q7LFX5 561 aaPredicted RBP20.64■□□□□ 0.89
NELFE-210ENST00000491139 PLXDC1Q8IUK5 500 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms