RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 GAPDHSO14556 408 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-207ENST00000490062 NDC80O14777 642 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 STX7O15400 261 aaKnown RBP17.35■□□□□ 0.37
ERCC3-207ENST00000490062 TTI1O43156 1089 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 PCDHGA12O60330 932 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 ADRA1DP25100 572 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 HTR1BP28222 390 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 ADCY8P40145 1251 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 GPR1P46091 355 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 THOP1P52888 689 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 ARHGAP8P85298 464 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 PDE1CQ14123 709 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-207ENST00000490062 TPRG1LQ5T0D9 272 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 ANKRD22Q5VYY1 191 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 RAET1GQ6H3X3 334 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 HEATR4Q86WZ0 1026 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 MINDY1Q8N5J2 469 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 MNS1Q8NEH6 495 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 SCARF2Q96GP6 870 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-207ENST00000490062 AGAP2Q99490 1192 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 MRM3Q9HC36 420 aaKnown RBP17.35■□□□□ 0.37
ERCC3-207ENST00000490062 TMEM9BQ9NQ34 198 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 RXFP3Q9NSD7 469 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 NLE1Q9NVX2 485 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-207ENST00000490062 CD84Q9UIB8 345 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 APPL1Q9UKG1 709 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.35■□□□□ 0.37
ERCC3-207ENST00000490062 TMEM131Q92545 1883 aa17.35■□□□□ 0.37
ERCC3-207ENST00000490062 FADS2P1A8MWK0 482 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 CSF2P04141 144 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 NME1P15531 152 aaKnown RBP17.34■□□□□ 0.37
ERCC3-207ENST00000490062 TPH1P17752 444 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 LAMA1P25391 3075 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
ERCC3-207ENST00000490062 ARRB1P49407 418 aaPredicted RBP17.34■□□□□ 0.37
ERCC3-207ENST00000490062 XIAPP98170 497 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 C2orf54Q08AI8 447 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 EIF2B5Q13144 721 aaKnown RBP17.34■□□□□ 0.37
ERCC3-207ENST00000490062 POU6F1Q14863 301 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 MORF4L2Q15014 288 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 SHBQ15464 509 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 AASDHQ4L235 1098 aaPredicted RBP17.34■□□□□ 0.37
ERCC3-207ENST00000490062 PCID2Q5JVF3 399 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 CERCAMQ5T4B2 595 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 KDM7AQ6ZMT4 941 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 CAND1Q86VP6 1230 aaKnown RBP17.34■□□□□ 0.37
ERCC3-207ENST00000490062 OR4K2Q8NGD2 314 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 SGSM3Q96HU1 749 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 WDR92Q96MX6 357 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 SERPINB12Q96P63 405 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 GAREM1Q9H706 876 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 FSCN3Q9NQT6 498 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 BFARQ9NZS9 450 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 SLC17A4Q9Y2C5 497 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 TCAF1Q9Y4C2 921 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 OR1A2Q9Y585 309 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 DGKBQ9Y6T7 804 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 WDR87Q6ZQQ6 2873 aa17.34■□□□□ 0.37
ERCC3-207ENST00000490062 LRP4O75096 1905 aa17.33■□□□□ 0.37
ERCC3-207ENST00000490062 GPR89AB7ZAQ6 455 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 TP73O15350 636 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 RAD51CO43502 376 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 SEC31AO94979 1220 aaKnown RBP17.33■□□□□ 0.36
ERCC3-207ENST00000490062 GPR89BP0CG08 455 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 CCT8P50990 548 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 ATXN3P54252 364 aaPredicted RBP17.33■□□□□ 0.36
ERCC3-207ENST00000490062 ITGA9Q13797 1035 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 SKIDA1Q1XH10 827 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 HIBCHQ6NVY1 386 aaPredicted RBP17.33■□□□□ 0.36
ERCC3-207ENST00000490062 MMGT1Q8N4V1 131 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 OR56A4Q8NGH8 313 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 NETO1Q8TDF5 533 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 BTN2A2Q8WVV5 523 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 HIC2Q96JB3 615 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 ERP44Q9BS26 406 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 KIFC1Q9BW19 673 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 LGR4Q9BXB1 951 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 BPIFA1Q9NP55 256 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 VPS18Q9P253 973 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 KCTD3Q9Y597 815 aa17.33■□□□□ 0.36
ERCC3-207ENST00000490062 GLYATL1P3A0A0U1RQE8 302 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 TMEM202A6NGA9 273 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 IVLP07476 585 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 EPHA8P29322 1005 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-207ENST00000490062 BLKP51451 505 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 DRG2P55039 364 aaKnown RBP17.32■□□□□ 0.36
ERCC3-207ENST00000490062 HNRNPKP61978 463 aaKnown RBP eCLIP17.32■□□□□ 0.36
ERCC3-207ENST00000490062 TSTD2Q5T7W7 516 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 IZUMO3Q5VZ72 239 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 DUPD1Q68J44 220 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 KANSL1Q7Z3B3 1105 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 ALYREFQ86V81 257 aaKnown RBP17.32■□□□□ 0.36
ERCC3-207ENST00000490062 BBOF1Q8ND07 529 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 OR13C4Q8NGS5 318 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 SEC14L1Q92503 715 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 GLYATL1Q969I3 302 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 SNF8Q96H20 258 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 CDKN2AIPNLQ96HQ2 116 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 TRIM51Q9BSJ1 452 aa17.32■□□□□ 0.36
ERCC3-207ENST00000490062 SPATA16Q9BXB7 569 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms