RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ACVR1CQ8NER5 493 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 ZNF398Q8TD17 642 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 ACMSDQ8TDX5 336 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 ELMO2Q96JJ3 720 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 WRAP53Q9BUR4 548 aaKnown RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 MKRN2Q9H000 416 aaKnown RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 ASB8Q9H765 288 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 CNOT10Q9H9A5 744 aaKnown RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 KCNK9Q9NPC2 374 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 SNX15Q9NRS6 342 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 NFKBIL1Q9UBC1 381 aaPredicted RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 FBXL21Q9UKT6 434 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 SLC39A10Q9ULF5 831 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 CORO1CQ9ULV4 474 aaPredicted RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 SMG5Q9UPR3 1016 aaKnown RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 VPS9D1Q9Y2B5 631 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 MRPS17Q9Y2R5 130 aaKnown RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 FADS3Q9Y5Q0 445 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 A0A1W2PP55 124 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 GOLGA8CPA6NN73 597 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 NEMP1O14524 444 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 PRPF4O43172 522 aaKnown RBP eCLIP20.78■□□□□ 0.92
SND1-214ENST00000489417 GPR39O43194 453 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 DNTTP04053 509 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 CHRNB1P11230 501 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 MAGEA12P43365 314 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 CCDC15Q0P6D6 951 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 NFATC2Q13469 925 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 LRRC32Q14392 662 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 USP10Q14694 798 aaKnown RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 ACOX1Q15067 660 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 GPR33Q49SQ1 333 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 AGBL4Q5VU57 503 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 CERS6Q6ZMG9 384 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 Q6ZVL8 140 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 TECPR1Q7Z6L1 1165 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 TMPRSS6Q8IU80 811 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 SLC41A1Q8IVJ1 513 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 RAVER1Q8IY67 606 aaKnown RBP20.78■□□□□ 0.92
SND1-214ENST00000489417 ZNF687Q8N1G0 1237 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 GPATCH11Q8N954 259 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 CDH19Q9H159 772 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 FAM83DQ9H4H8 585 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 CD84Q9UIB8 345 aa20.78■□□□□ 0.92
SND1-214ENST00000489417 TRBV5-4A0A0C4DH59 114 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 TMEM120BA0PK00 339 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 KRBA1A5PL33 1030 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 AP1G1O43747 822 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 TYK2P29597 1187 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 ETV3P41162 512 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 RBM20Q5T481 1227 aaKnown RBP20.77■□□□□ 0.91
SND1-214ENST00000489417 LYPLAL1Q5VWZ2 237 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 CMC1Q7Z7K0 106 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 SERPINA9Q86WD7 417 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 NRSN1Q8IZ57 195 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 BANPQ8N9N5 519 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 CXorf40AQ8TE69 158 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 LPGAT1Q92604 370 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 APOPT1Q96IL0 206 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 SHDQ96IW2 340 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 COQ10AQ96MF6 247 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 TTC1Q99614 292 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 OMDQ99983 421 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 SLC6A17Q9H1V8 727 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 CAB39LQ9H9S4 337 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 PCMTD2Q9NV79 361 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 CRLS1Q9UJA2 301 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 CRYL1Q9Y2S2 319 aa20.77■□□□□ 0.91
SND1-214ENST00000489417 WNT9AO14904 365 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 TYROBPO43914 113 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 RNASEH2AO75792 299 aaKnown RBP20.76■□□□□ 0.91
SND1-214ENST00000489417 GM2AP17900 193 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 UGT1A6P19224 532 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 SAT1P21673 171 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 UGT1A1P22309 533 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 UGT1A4P22310 534 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 TARSP26639 723 aaKnown RBP20.76■□□□□ 0.91
SND1-214ENST00000489417 UGT1A3P35503 534 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 UGT1A5P35504 534 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 PPARGP37231 505 aaPredicted RBP20.76■□□□□ 0.91
SND1-214ENST00000489417 STARD6P59095 220 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 POU4F1Q01851 419 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 PPARDQ03181 441 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 ITGA9Q13797 1035 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 DBN1Q16643 649 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 TMEM92Q6UXU6 159 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 SYNPOQ8N3V7 929 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 DTX3LQ8TDB6 740 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 GANCQ8TET4 914 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 CABS1Q96KC9 395 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 NDNQ99608 321 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 LMAN1LQ9HAT1 526 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 LTB4R2Q9NPC1 389 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 MKS1Q9NXB0 559 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 SERGEFQ9UGK8 458 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 SCML1Q9UN30 329 aa20.76■□□□□ 0.91
SND1-214ENST00000489417 F5P12259 2224 aa20.75■□□□□ 0.91
SND1-214ENST00000489417 UBA6A0AVT1 1052 aaPredicted RBP20.75■□□□□ 0.91
SND1-214ENST00000489417 FAM47DPA6NHR8 397 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms