RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PRORSD1PA6NEY8 169 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 RHOCP08134 193 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 TCN1P20061 433 aaPredicted RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 ZNF140P52738 457 aaPredicted RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 CDKL1Q00532 357 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 MYBPC1Q00872 1141 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 LSAMPQ13449 338 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 DENND1CQ8IV53 801 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 BCL7CQ8WUZ0 217 aaPredicted RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 DGCR14Q96DF8 476 aaKnown RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 CAPNS2Q96L46 248 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 ZNF597Q96LX8 424 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 CWH43Q9H720 699 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 SCUBE2Q9NQ36 999 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 TRPM5Q9NZQ8 1165 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 AFF4Q9UHB7 1163 aaKnown RBP26.02■■□□□ 1.76
HLA-C-208ENST00000487245 LZTS1Q9Y250 596 aa26.02■■□□□ 1.76
HLA-C-208ENST00000487245 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.01■■□□□ 1.75
HLA-C-208ENST00000487245 GJB5O95377 273 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 EFEMP2O95967 443 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 TFAP2AP05549 437 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 FAM58BPP0C7Q3 252 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 ARSAP15289 507 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 OR1D2P34982 312 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 APOFQ13790 326 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 CLEC6AQ6EIG7 209 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 PIM3Q86V86 326 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 SATL1Q86VE3 508 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 PCYOX1LQ8NBM8 494 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 VPS9D1Q9Y2B5 631 aa26.01■■□□□ 1.75
HLA-C-208ENST00000487245 ADAM12O43184 909 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 COCHO43405 550 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 CLPTM1O96005 669 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 CR2P20023 1033 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 ALDH7A1P49419 539 aaKnown RBP26■■□□□ 1.75
HLA-C-208ENST00000487245 SEMA3AQ14563 771 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 ARHGEF6Q15052 776 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 C6orf10Q5SRN2 563 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 KANK2Q63ZY3 851 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 PRMT9Q6P2P2 845 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 FUNDC1Q8IVP5 155 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 SPNS2Q8IVW8 549 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 GPATCH1Q9BRR8 931 aaKnown RBP26■■□□□ 1.75
HLA-C-208ENST00000487245 PCDHAC1Q9H158 963 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 A0A1B0GVM2 712 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 C2orf81A6NN90 581 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 CDK14O94921 469 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 ALDOCP09972 364 aaKnown RBP26■■□□□ 1.75
HLA-C-208ENST00000487245 ZNF37AP17032 561 aaPredicted RBP26■■□□□ 1.75
HLA-C-208ENST00000487245 HDCP19113 662 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 RPS24P62847 133 aaKnown RBP26■■□□□ 1.75
HLA-C-208ENST00000487245 PTPRCAPQ14761 206 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 ADRM1Q16186 407 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 TCTN1Q2MV58 587 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 PTGR2Q8N8N7 351 aaPredicted RBP26■■□□□ 1.75
HLA-C-208ENST00000487245 PNPLA1Q8N8W4 532 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 DDI1Q8WTU0 396 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 ZUFSPQ96AP4 578 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 PBXIP1Q96AQ6 731 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 SLCO4A1Q96BD0 722 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 RMDN1Q96DB5 314 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 EFHD1Q9BUP0 239 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 CREBZFQ9NS37 354 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 NDUFAF1Q9Y375 327 aa26■■□□□ 1.75
HLA-C-208ENST00000487245 DNAH12Q6ZR08 3092 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 PFDN6O15212 129 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 HSPA8P11142 646 aaKnown RBP25.99■■□□□ 1.75
HLA-C-208ENST00000487245 CORO1AP31146 461 aaKnown RBP25.99■■□□□ 1.75
HLA-C-208ENST00000487245 SCNN1BP51168 640 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 ATXN3P54252 364 aaPredicted RBP25.99■■□□□ 1.75
HLA-C-208ENST00000487245 NAA20P61599 178 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 SH3BP2P78314 561 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 TXNL4AP83876 142 aaKnown RBP25.99■■□□□ 1.75
HLA-C-208ENST00000487245 SPATS1Q496A3 300 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 ADGRF1Q5T601 910 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 GLT6D1Q7Z4J2 308 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 CHERPQ8IWX8 916 aaKnown RBP25.99■■□□□ 1.75
HLA-C-208ENST00000487245 OR52K2Q8NGK3 314 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 SH3RF2Q8TEC5 729 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 MYRFLQ96LU7 910 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 CNBD2Q96M20 576 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 C3orf30Q96M34 536 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 ATOH8Q96SQ7 321 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 HOPXQ9BPY8 73 aaPredicted RBP25.99■■□□□ 1.75
HLA-C-208ENST00000487245 CCDC68Q9H2F9 335 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 AKTIPQ9H8T0 292 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 AGO1Q9UL18 857 aaKnown RBP25.99■■□□□ 1.75
HLA-C-208ENST00000487245 PCNTO95613 3336 aa25.99■■□□□ 1.75
HLA-C-208ENST00000487245 STC2O76061 302 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 PARNO95453 639 aaKnown RBP25.98■■□□□ 1.75
HLA-C-208ENST00000487245 PIRTP0C851 137 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 MTHFD2P13995 350 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 PRMT2P55345 433 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 CYTH1Q15438 398 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 DEFB115Q30KQ5 88 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 C6orf52Q5T4I8 152 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 PHYKPLQ8IUZ5 450 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 GALNT4Q8N4A0 578 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 EME1Q96AY2 570 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 TAS2R13Q9NYV9 303 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms